Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_1286
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Entry
Gdia_1286 CDS
T00798
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gdj01011
]
Gdia_1286
Enzymes [BR:
gdj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Gdia_1286
Peptidoglycan biosynthesis and degradation proteins [BR:
gdj01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Gdia_1286
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
ACI51068
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All DBs
Position
1430186..1432192
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AA seq
668 aa
AA seq
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MRGTTHTPPQIAVRAFLAGAALLAGATFTPLRVQTANARNTDGHPSGPGERNEETALAMP
RIAPPGGGAVGLAQPLSPDVVAQVRRIFSLQRAGAFDDAIRETAQLRDDTLLGDILADRY
LNPAYHPAPGQLRLWLRTFSTLADAPAIHTLLAGLSPRGASLPPLPAQMALAAGTGAAAM
RPPEEDDPAGRAFARNPLLDRTVRDRAEQGVKGARSALHLIKITPGIGDLYAAQLRAEVA
MTLFSAGETALALRTGQDAFIQSGGRIGLAGYVAGLAAWRRGRPDIAEPLFEGASRAELT
AAGIRAGAAFWAARAHRNTGDLAAYHPWLHRAAAAPHTFYGLLAAQLLGLRPAKGQHAAD
TSLPGEPLSGEPAAPSAMPAEDRTMLHAGAPVMGEIDVDAVAAKPAGRRAFALLQVGETA
RAEAALRRLWPEVQGDAALCRSIQLVADAAGLTGLSAQLSSLLASQGAPQPAVPSRFPTP
RLAPSHGFRVDPALVYALTRLESNFDSGAISGSGAHGLMQIMPTTASFVTGRTRRFEAAP
ALLHNAATNLDIGQLYVLYLAHLSEQHAGGRHPSGGDLVRLLASYNAGPGAISRQEALND
CGDDPLLFIESLPSAETRDYVHRALTYLWIYADQMGLPTPSLETLARNEWPAFAAEQDLA
GRHFHTIH
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggacaacacacacacccccacagatcgcggtccgggcctttctggccggtgcc
gcccttctggcaggagcgacgttcacgccgctgcgtgtccagaccgcgaacgcccggaac
acggacggacatccgtccggcccgggcgagcggaacgaggaaacggccctggccatgccg
cggatcgcgccgcctggtggcggagcggtcggactggcccagccgctgagcccggacgtc
gtcgcccaggtacgccggatcttcagcctgcagcgcgcgggggcgttcgacgacgccatc
cgggagaccgcgcaattgcgcgacgacactctgctgggcgacatcctggccgaccgctac
ctgaatcccgcctatcatcccgcgccggggcagttgcggctgtggctgcgcaccttttcc
accctggccgacgcccccgccatccacacgctgctggccggcctgtcgccgcgcggcgcc
agcctgccgccgctgcccgcgcagatggcgctggcggccggcaccggagcggcggccatg
cgcccgccggaagaggacgatcccgccggccgggccttcgcccgcaacccgctgctggac
cggacggtgcgcgaccgggccgagcagggggtgaagggcgcgcgcagcgcgctgcacctg
atcaagatcacgccgggcatcggcgacctgtatgccgcgcagttgcgcgccgaggtcgcg
atgacgctgttcagcgcgggcgaaaccgccctggcgctgcggacggggcaggatgccttc
atccagtccggcggccggatcggcctggccggctatgtcgccggcctggcggcctggcgc
cggggacggcccgacattgccgaaccgctgttcgaaggcgcgtcgcgcgccgagctgacg
gcggccggcatccgggccggcgccgccttctgggcggcccgggcgcaccgcaataccggc
gacctggcggcctatcatccctggctgcatcgcgccgccgccgccccgcacacgttctac
ggcctgctggcggcccagttgctgggcctgcgcccggcgaagggccagcacgccgcggac
acgtcccttcccggtgagcccctttccggcgaacccgccgcgccgtccgccatgccggcg
gaagaccggacgatgctgcatgccggcgcgccggtcatgggcgaaatcgacgtggacgcc
gtggccgcgaaaccggccgggcggcgggccttcgccctgttgcaggtcggcgagacggcc
cgggcggaagccgccctgcgccgcctgtggcccgaggtgcagggcgatgccgccctgtgc
cgctcgatccagcttgtggccgatgccgccgggctgacgggcctgtcggcgcaattgtcg
tcgctgctggcatcacagggcgcgccccagccggccgtgccctcccgctttccgacgccg
cgcctggcgcccagccatgggttcagggtcgatccggcgctggtctatgccctgacgcgc
ctggaatcgaatttcgacagcggggcgatttccgggtccggcgcgcatgggctgatgcag
atcatgccgacgaccgccagcttcgtgaccggcaggacccggcgtttcgaagcggccccg
gcgctgctgcacaatgcggcgacgaacctggatatcgggcagctctacgtcctttacctg
gcgcacctgagcgaacagcatgccggcggccgtcacccgtccggcggcgacctggtgcgg
ctgctggccagctacaatgccgggccgggggcgatttcccgacaggaagccctgaacgat
tgcggtgacgacccgctgctgttcatcgaaagcctgcccagcgccgagacgcgggattac
gtccatcgcgccctgacctatctgtggatctatgccgaccagatgggcctgcccacgccg
tcgctggaaaccctggcgcgcaacgaatggcccgccttcgccgccgagcaggacctggcc
ggccgccacttccacaccatacactga
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