Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_1295
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Entry
Gdia_1295 CDS
T00798
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gdj03400
]
Gdia_1295
Enzymes [BR:
gdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gdia_1295
DNA repair and recombination proteins [BR:
gdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Gdia_1295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ACI51077
LinkDB
All DBs
Position
complement(1442218..1445775)
Genome browser
AA seq
1185 aa
AA seq
DB search
MNPLDAIGLANARQGEASDPGASVFVSASAGSGKTKLLIDRLLRLMLPRPAPDARGDGAG
DLLAGADPARIQCLTFTKAAAAEMAIRLQKRLGSWVTLPDASLDRELAFLSVPPCEATRR
AARELFARVLDLPGGMRIGTIHAFCQSLLRRFPVEAAISPHFTLVEDTDARIAMGESVEA
VVGGGGPAVAILASQIGAGDFAALIGGLQARLRQLQPVITALEQDRAAIEAALMRVLGTR
GRDADAVRRAACAVPDEERLRGMLRIVAEQASTAVRAKAVAMLDWMALAPDARAAQWDAW
RAALVKQDGEPRRRGGLNAKFDETQPQIGDALLAEAERIIAVDEECRAIAILRVSQALLD
VAVPVLHRYGERKRGRGLVDYDDLIERTLDLLKDPGAAWVLYKLDGGIDHLLLDEVQDTS
PDQWAIAGGLTSEFFAGAGAHDDGAPPRTLFAVGDYKQSIYSFQGADPAAFRHWRQRFRR
QVEDAGRMWKEPALTVSFRSTAPVLRLVDSVFSLPDAARGLVEPGGGVPGHLSARPGQGG
RVELWPLTPIDEAGEDANPWAAPRENEGQSTAAQRLADSLAAWIVAELRRPPEPGQAPLT
PGDVLVLVPRRSNFVRALIRALKTQDVPVATLVRTGLVDQVAVQDLMALCDALLLPQDDL
TLACVLTSPLGGVSDDGVMDLAVGRGDRPLWAVLRDRHAERPDWRAAWTMLDALFRRVDY
ASPYGLLSEALGPLGGRARLLARLGPEAAEPVDELLSAALRYESLHPASLQGFLHWLRAS
QETVKREPDAAADMVRVMTAHGAKGLQARLVILPDTVGTAKFDGGLVWARDQPSGLDLPL
WVPRAEMGIGVTRALQQTIRAAAIEEYNRLLYVALTRASDRLVVCGWQQKRMVTDESWYM
LCRRGFEQAGAEERPFDLGWEGTRLVLEEAPARLSGAPAAPRSRPEPPAVALPAWMGRAP
DWIATPPSAEAKLLRPLVPSRPDDAPLGPQPAVRSPLAIARARRPAAREQALRKGQLVHA
LLQYLPDRPAADRARVARDWLSRTGHGLDAAEQARIAAQVLAVMDDPAMAPLFGPGSRAE
QPLAGIAGGAVIVGQVDRMMVRPGDVLLCDFKTNRQPPDDAASVPVLYLRQMASYRALLG
ALYPDRPVRCTLVWTEDVRIMPLPDSLLAQHAPGQASGGQTPEGP
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgctggatgcgatcggcctggccaacgccaggcagggcgaggcctcggacccg
ggggcgtcggtcttcgtctcggcctcggcgggcagcggcaagaccaagctgctgatcgac
cggctgctgcggctgatgctgccgcgccccgcgcccgacgcgaggggggacggggcgggg
gacctgcttgcgggggcggacccggcgcgcatccagtgcctgaccttcaccaaggcggcg
gcggcggaaatggcgatccgcctgcagaagcggctggggagttgggtaacgctgcccgac
gcgtccctggaccgggaactggccttcctgtcggtcccgccgtgcgaggcgacacgccgc
gcggcacgcgaattgttcgcccgcgtgctggacctgccgggcggaatgcggatcggcacc
atccatgccttctgccagtccctgttgcggcgctttccggtcgaggccgcgatcagcccg
catttcaccctggtcgaggacacggatgcccgcatcgccatgggcgaatccgtcgaagcc
gtggtcggcggcggcgggccggcggtcgcgatcctggccagccagatcggtgccggggat
ttcgccgccctgatcggcggattgcaggcccggctgcggcagttgcagccggtcatcacg
gcgctggagcaggaccgcgccgcgatcgaggccgcgctgatgcgcgtgctgggcacgcgc
ggccgcgatgcggacgcggtgcgccgcgccgcctgcgccgtcccggacgaggagcggctg
cgcgggatgctgcgtatcgtggccgaacaggcctcgaccgccgttcgcgccaaggccgtc
gcgatgctggactggatggccctggcgccggacgcccgcgccgcgcaatgggacgcgtgg
cgcgcggccctggtgaagcaggacggcgaaccgcgccgccggggcggcctgaacgcgaaa
ttcgacgaaacgcagccgcagatcggcgacgccctgctggccgaggccgagcggatcatc
gcggtggacgaggaatgccgggccatcgccatcctgcgcgtcagccaggccctgctggat
gtcgcggtgccggtgctgcatcgctatggcgagcgcaagcgcgggcgcggcctggtcgat
tacgacgacctgatcgaacggaccctggacctgctgaaggacccgggcgcggcctgggtg
ctgtacaagctcgatggtggcatcgaccacctgctgctggacgaggtgcaggacacctcg
cccgaccagtgggcgatcgcgggcggcctgacctcggaattcttcgccggggcgggcgcg
catgatgacggcgccccgccgcgcaccctgttcgcggtcggcgactacaagcagtccatc
tattccttccagggggccgatcccgccgccttccgccattggcgccagcgcttccgccgc
caggtcgaggatgcgggcaggatgtggaaggaaccggcgctgaccgtgtccttccgctcc
accgcgccggtgctgcgcctggtggacagcgtcttttccctgcccgacgccgcgcgcgga
ctggtcgagccgggcgggggcgtgcccggccatctctccgcccggccggggcagggcggg
cgggtcgaactctggccgctgaccccgatcgacgaggccggcgaggacgccaacccgtgg
gcggccccgcgcgagaatgaagggcaatccaccgccgcccagcgcctggccgattccctg
gccgcctggatcgtggcggaattgcgccgcccgcccgaacccgggcaggccccgctgacg
ccgggcgacgtgctggtgctggtgccccggcgctccaatttcgtgcgggccctgatccgc
gcgctgaagacgcaggacgttccggtggcgacgctggtgcgcaccggcctggtggaccag
gtggcggtgcaggacctgatggcgctgtgcgacgcgctgctgctgccgcaggacgacctg
acgctggcctgcgtgctgacctcgccactgggcggggtgtcggatgacggggtgatggac
ctggcggtcggacgcggcgaccggccgctctgggccgtgctgcgcgaccgccatgccgaa
cggccggactggcgcgcggcctggacgatgctggatgcgctgttccgccgcgtcgattac
gcctcgccctacggattgctgtccgaggcgctggggccgctgggcggccgcgcccgcctg
ctggcccgcctgggtcccgaggccgccgagccggtggacgaactgctctccgcggccctg
cgctacgaatcgctgcatccggcctcgctgcaggggttcctgcactggctgcgcgcgtcg
caggaaaccgtgaagcgcgaacccgacgcggcggccgacatggtgcgggtcatgaccgcc
catggcgccaagggattgcaggcccggctggtgatcctgcccgacacggtgggcacggcg
aagttcgacggcggcctggtctgggcacgggaccagcccagcggcctggacctgccgctg
tgggtgccgcgcgccgaaatgggcatcggcgtgacccgcgcgctgcagcagaccatccgc
gccgccgcgatcgaggaatataaccgtctgctctatgtcgccctgacccgggccagcgac
cggctggtggtctgcggctggcagcagaagcgcatggtgacggacgaaagctggtacatg
ctctgccgtcgcggcttcgaacaggccggcgccgaggaacgccccttcgacctggggtgg
gaaggcactcgcctggtgctggaggaagcccccgcgcgcctgtccggcgcccccgccgcg
ccccgatcccggcccgagccccccgccgtggcgctacccgcctggatgggccgcgcgccg
gactggatcgccaccccgccctccgccgaggcgaagctgctgcgcccgctggtgcccagc
cgccccgacgatgccccgctgggcccgcagcccgccgtgcgctcccccctggccatcgca
cgcgcccgccgccccgccgcgcgcgaacaggccctgcgaaagggtcaactggtgcatgcg
ctgctgcaatacctgcccgaccggccggcggccgatcgcgcccgggtcgcgcgcgactgg
ctgtcgcgtaccgggcatggcctggacgccgccgaacaggcacgcatcgccgcccaggtg
ctggcggtgatggacgatccggccatggcgccgctgttcggacccggcagccgcgcggag
cagcccctggccggcatcgccggcggtgcggtgatcgtcggccaggtcgaccgcatgatg
gtgcggcccggcgacgtgctgctgtgcgatttcaagaccaaccgccagccgccggacgac
gcggcatcggtgcccgtgctgtacctgcgccagatggcgtcctaccgcgcgctgcttggt
gccctctatcccgatcgccctgttcggtgcacccttgtgtggaccgaggacgtccggatc
atgcccttgcccgattcgcttctggcacagcatgctccgggtcaggcctcaggcgggcag
acgcccgaaggaccataa
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