Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_1645
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Entry
Gdia_1645 CDS
T00798
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gdj03032
]
Gdia_1645
03400 DNA repair and recombination proteins [BR:
gdj03400
]
Gdia_1645
Enzymes [BR:
gdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Gdia_1645
DNA replication proteins [BR:
gdj03032
]
Prokaryotic type
DNA Topoisomerases
Gdia_1645
DNA repair and recombination proteins [BR:
gdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Gdia_1645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
HC2
Motif
Other DBs
NCBI-ProteinID:
ACI51422
LinkDB
All DBs
Position
1830787..1833561
Genome browser
AA seq
924 aa
AA seq
DB search
MTDVVVVESPAKAKTINKYLGDGFTVLASFGHVRDLPPKDGSVRPDENFAMDWQADERGS
RQMAAIAKALRGARHLYLATDPDREGEAISWHVRAMLEEKNLLKGVDVQRVTFNEITKSA
IRAAMAQPRDLDQPLIEAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICE
REAEIESFRAREYWTVAAQFTTPGGAAFTARLTHLAGRKLDQFDLHDEAGAMAAKAAVEA
GRFAVQSVERRKVRRNPPPPFTTSTMQQEASRKLGMGAQGTMRTAQQLYEGIDLGGETVG
LITYMRTDGVQMAGEAIAAIRGHIGESFGAPYVPEKARIYSTKAKNAQEAHEAIRPTDVS
RTPAQMARYLNDEQRRLYELIWKRSVASQMQSAELDQVIVEIADAGGAATLRATGSMIAF
DGFLKLYSEGRDDAAPKDEQDDDSRMLPPMRERDALKTGEVAADQHFTQPPPRFSEASLV
KKMEEIGIGRPSTYASILTVLRDRNYVRLDARRFVPEDRGRLVTAFLTSFFERYVDTQFT
AGLEEQLDDISGGRADWRDVMSAFWQDFSRAVDQTKDLKISDVISALDADLAPHFFPAHL
DGSDPRVCTACGTGRLGLKLGRYGAFIGCSNYPTCQFTRRLVVDPKEDGEADTLKDGMRL
LGQTPGGEDVTVRRGPWGLYVQQGEPDPEDKKAKPRRATIPRGIEGDKITLDQALGLLSL
PRVVGIHPETGEQIEAGLGRFGPYVKMGAVYGSLDKDDDILTVGLNRAVDVLARKLASVR
TIAPHPKDGEPVIVRKGRFGPYIQHGTMVVNVPRGEAMEDVTLDQAVALLAEKGKPLKPK
GKAAAKKAPARKTAARKAPAKTAAKKAAPDGDADTQARAAKPPARKAAARKTPAGKATGK
TAKGKAEPGEGAGPRTRRTATEAG
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgtcgtcgtggtcgagtcgcctgccaaggcgaagacgatcaacaagtatctg
ggggacggattcacggttcttgcctcgttcggccatgtccgcgacctgccgccgaaggat
ggcagcgtccgccccgacgagaatttcgccatggactggcaggccgacgagcgcggcagc
cggcagatggccgcgatcgccaaggcgttgcgcggggcgcggcatctgtacctggccact
gacccggatcgcgagggcgaggcgatttcctggcatgtccgcgcgatgctggaggaaaag
aacctgctgaagggggtggacgtccagcgcgtcaccttcaacgagatcaccaagagcgcc
atccgcgccgcgatggcccagccgcgcgacctggaccagccgctgatcgaggcctatctg
gcccggcgcgcgctggattacctggtgggcttcaccctgtcgcccgtgctgtggcgcaag
ctgccggggtcgcgcagcgccggccgggtacagtcggtcgccctgcgcctgatctgcgag
cgcgaggcggagatcgagagcttccgcgcccgcgaatactggacggtggccgcgcagttc
accacgcccggcggcgcggccttcaccgcgcggctgacgcacctggccggccgcaagctg
gaccagttcgacctgcatgacgaagccggggccatggcggccaaggcggccgtcgaggcc
gggcgcttcgccgtgcagtcggtggaacggcgcaaggtccgccgcaacccgccgccgccc
ttcacgacctcgaccatgcagcaggaagcgtcgcgcaagctgggcatgggcgcgcagggc
accatgcgcaccgcccagcagctgtacgaaggcatcgacctgggcggcgagacggtcggt
ctgatcacctatatgcgaaccgatggcgtgcagatggccggcgaggccatcgccgccatc
cgcggccatatcggcgagagcttcggcgcgccctacgtgcccgagaaggcccggatctat
tccaccaaggcgaagaacgcccaggaagcgcacgaggcgatccgccccaccgatgtcagc
cgcaccccggcgcagatggcccgctacctgaatgacgagcagcggcggctgtacgaactg
atctggaaacggtcggtcgccagccagatgcagtcggccgaactggaccaggtgatcgtc
gagatcgcggatgccggaggggccgccaccctgcgcgccaccgggtcgatgatcgccttc
gacgggttcctgaagctgtacagcgaaggccgggacgacgccgcgccgaaggacgagcag
gacgacgacagccgcatgctgccgccgatgcgcgagcgcgacgcgctgaaaaccggcgag
gtcgcggccgaccagcatttcacccagccgccgccgcgcttctccgaagcgtcgctggtc
aagaagatggaagagatcgggatcggccggccgtcgacctatgcctcgatcctgacggtg
ctgcgcgaccgcaattacgtgcggctggatgcccgccgcttcgtccccgaggaccggggg
cggctggtcaccgcgttcctgacctcgttcttcgaacgctatgtggacacgcagttcacg
gcggggctggaagagcagctggacgacatatccggtgggcgggccgactggcgcgacgtg
atgtcggccttctggcaggatttttcccgcgcggtggaccagacgaaggatctgaagatc
tccgacgtcatcagcgcgctggatgccgacctggcgccgcatttcttccccgcgcacctc
gacggcagcgatccgcgcgtctgcaccgcctgcggcaccgggcggctggggctgaagctg
gggcggtacggcgccttcatcggctgttccaactatccgacctgccagttcacccgccgc
ctggtggtggaccccaaggaggacggcgaggccgacacgctgaaggacggcatgcgcctg
ctgggccagacgcccggcggcgaggatgtgaccgtgcggcgcggcccgtggggcctgtac
gtccagcagggcgaacccgaccccgaggacaagaaggccaagccccggcgcgccaccatt
ccgcgcgggatcgaaggcgacaagatcacgctggaccaggcgctgggcctgctctcgctg
ccgcgggtcgtcggcatccatccggaaaccggcgagcagatcgaggccgggcttggccgc
ttcgggccatacgtgaagatgggcgcggtctatggatcgctggacaaggatgacgacatc
ctgacggtcgggctgaaccgggcggtggacgtgctggcccgcaagctggcctcggtccgc
accatcgcgccgcaccccaaggatggcgagccggtgatcgtccgcaagggacggttcgga
ccgtatatccagcatggcacgatggtggtgaacgtgccccggggcgaggccatggaggac
gtgaccctggaccaggcggtggcgctgctggccgaaaagggcaagccgctgaagcccaag
ggcaaggccgcggcgaagaaggcccccgcccggaagacggccgccaggaaggcgccggcc
aagaccgcggcgaagaaagccgccccggacggggatgccgatacgcaggccagggccgcg
aaacccccggcgcgcaaggccgccgcccgcaagaccccggccggcaaggcaacgggcaag
accgcgaagggcaaggccgaacccggcgagggtgccgggccccgcacgcggcgcacggcg
accgaggccggctga
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