Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_2905
Help
Entry
Gdia_2905 CDS
T00798
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj00550
Peptidoglycan biosynthesis
gdj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Gdia_2905
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gdj01002
]
Gdia_2905
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gdj01011
]
Gdia_2905
Enzymes [BR:
gdj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Gdia_2905
Peptidases and inhibitors [BR:
gdj01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Gdia_2905
Peptidoglycan biosynthesis and degradation proteins [BR:
gdj01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Gdia_2905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ACI52636
LinkDB
All DBs
Position
3181881..3183143
Genome browser
AA seq
420 aa
AA seq
DB search
MATKKLHFLPVIVLCSGRVPENDHKVAEYDADPVTGERALADGSWTDRRGMDAGRGWFAR
LRHVAASGRGKVLRLSFGLSVGCAAVMAGFVPRAHAQYVGQISSIVMDARTGAILSQSNP
DLQRFPASLTKLMTLYLAFKALHAGQITLDQSVPVSAHSASMEPSKLGLMPGSYLTVEQA
VLGLVTKSANDAACALGELMGGGDEGRFADLMTRQARALGMTRTTFRNASGLPNDEQVTS
ARDLALLTRQIITEFPDYYHYFSVPAFYFHGRQVPNHDPMLRIYPGADGLKTGYTTDAGR
NLVTSAIRENVRLIGVVLGARTNPQRSAVMASILDDGFRQEGVADVRRPLVLARGHRGRA
AIMLAAAARAANAGPEQVAEAPVAPRRHGVARHAHARVPAHVHMVAAGHVAHRRRGHNQG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaaaaagctgcattttcttccggttatcgttctttgctctggacgggttccg
gaaaatgaccataaagtcgccgaatatgatgcggatcctgtgacgggggaacgggcgttg
gccgacggctcatggacggacaggcgggggatggacgccgggcggggatggttcgcccga
ctgcgtcatgtcgcggcatcggggcgcgggaaggtgctgcgcctgtccttcggcctgtcg
gtggggtgcgccgccgtcatggcgggcttcgtgccccgggcccatgcccagtatgtcggc
cagatcagctcgatcgtcatggacgcccgcaccggggcgatcctgtcgcaatccaatccc
gacctgcagcggtttcccgccagcctgaccaaacttatgacgctgtacctggcgttcaag
gccctgcatgccggccagatcacgctggaccagtcggtgcccgtgtcggcccattccgca
tcgatggaaccgtcgaagctgggcctgatgccgggcagctacctgacggtcgaacaggcg
gtgctggggctggtgaccaagtcggccaacgacgcggcctgcgccctgggcgaactgatg
ggcggcggggatgagggccggttcgccgacctgatgacccgtcaggcccgggcgctgggg
atgaccaggaccaccttccgcaacgcgtccggcctgccgaatgacgagcaggtgacatcg
gcgcgcgacctggcgctgctgacgcggcagatcatcaccgaattcccggattattatcat
tatttctcggtcccggccttctatttccacgggcggcaggtgcccaaccacgacccgatg
ctgcggatctatccgggggcggacgggctgaagaccggatacacgaccgatgccggccgc
aacctggtcacgtccgcgattcgcgagaacgtgcgcctgatcggcgtggtgctgggcgcg
cggaccaacccgcagcgcagcgccgtcatggccagcatcctggatgacgggttccgccag
gaaggggtggcggacgtgcgccgtccgctggtgctggcgcgcgggcatcgcggccgggcg
gcgatcatgctggccgcggccgcgcgggcggccaatgcgggccccgaacaggtggccgaa
gcgcccgtggccccccgccgccatggcgtggcgcgacatgcgcacgcccgtgttccggcg
catgtccatatggtcgcggccggtcatgtcgcgcaccgccgccgtggacacaaccagggc
tga
DBGET
integrated database retrieval system
