Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_3016
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Entry
Gdia_3016 CDS
T00798
Name
(GenBank) ABC transporter related
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Gdia_3016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gdj02000
]
Gdia_3016
Enzymes [BR:
gdj01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Gdia_3016
Transporters [BR:
gdj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Gdia_3016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_16
AAA_22
AAA_21
AAA_30
ABC_ATPase
AAA_29
APS_kinase
RsgA_GTPase
COX14
Motif
Other DBs
NCBI-ProteinID:
ACI52746
LinkDB
All DBs
Position
3302094..3303911
Genome browser
AA seq
605 aa
AA seq
DB search
MNVVPPRTPSPAAASLVPPGGGPQNSERSTVLLRRLWRSEVRLHRGRIASVIGLTVVMAS
LTGLYPLVIQRALDMFAAHDPRILYQVPALVILITAAKALSQYGQTVAVQNLVLIVIRGL
QARMFRHLLHTDISRIEREAPAQLSARFTTDAVSIREAMIRAVNSIGDVVTVAGLVVSMF
YMDWELSLIAAVLYPVAAVPIQRLGKKVRRASGGMQERMGETSALLTESFAQARTVRVYR
LEQNEEARVSHTFDQLHMALQRIARGRARVDPVLEVLGGSAVAAVLGFAGWRAARGGATL
GDFSGFVAALLLAARPLRALGSLNAALQEGAAGLERIFAVIDEPADIVESPDARPLPAGN
GHLRFEDVSFFYPDGRAGLDGLSFEARPGLTVALVGPSGAGKSTALSLIPRLHDVGAGRI
VLDGVDLRALRLGDLRDAIAYVSQDTLLFDLSVADNIRIGRPGATDAEIRTAARAAAAES
FIDALPEGFATRVGPGGQRLSGGQRQRVALARALLRDPRVLLLDEATSALDSESEALVQQ
ALGQLRQGRTTIVVAHRLSTVRSADLVVAMAGGQGVECGTHAALMEADGLYARMVRTQAF
GEVGP
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgtcccgcctcgaaccccgtcccctgccgccgcgtcgctggtgccccccggg
ggcggcccgcagaattccgagcgcagtaccgtcctgctgcgccggctgtggcggtcggaa
gtgcgcctgcatcgcgggcgcatcgcatcggtgatcgggctgaccgtcgtgatggcgtcg
ctgaccggcctgtacccgctggtgatccagcgggcgctggacatgttcgccgcccatgat
ccgcgcatcctctaccaggtgccggcgctggtgatcctgatcaccgccgccaaggcgctg
tcccagtacggccagaccgtggcggtgcagaacctggtcctgatcgtgatacgcgggctg
caggcgcgcatgttccggcatctgctgcacaccgatatctcgcgcatcgagcgcgaggcc
ccggcgcagctttcggcgcgcttcaccaccgatgccgtgtcgatccgcgaggcgatgatc
cgcgcggtcaattcgatcggcgacgtggtcacggtcgcgggcctggtcgtgtccatgttc
tacatggattgggaactcagcctgatcgccgccgtgctgtatccggtcgcggcggtgccg
atccagcgcctgggcaagaaggtccgccgtgcctcgggcggcatgcaggaacgcatgggc
gagacctcggccctgctgaccgaaagcttcgcgcaggcccgcacggtgcgcgtctaccgg
ctggaacagaacgaggaggcccgcgtcagccacacgttcgaccagttgcacatggccctg
cagcgcatcgcccgggggcgggcccgcgtcgatccggtgctggaggtgctgggtggctcg
gcggtcgccgccgtgctggggttcgccggctggcgcgccgcgcggggcggcgcgacgctg
ggcgatttttccggcttcgtggcggccctgctgctggccgcgcgcccgctgcgggcgctg
ggatcgctgaacgcggcgttgcaggaaggggcggccgggctggaacgcatcttcgccgtg
atcgacgagcccgccgacatcgtcgaatcccccgatgcccgtccgctgcccgccggcaac
ggccatctgcgcttcgaggacgtgtccttcttctatccggacggacgggccgggctggac
gggctgagcttcgaggcccggcccgggctgaccgtggcgctggtcggcccgtccggggcc
gggaaatccaccgccctgtcgctgatcccccgcctgcatgacgtcggcgccgggcgcatc
gtgctggacggggtcgacctgcgggcgctccggctgggcgacctgcgcgacgccatcgcc
tatgtcagccaggacacgctgctgttcgacctgtcggtggccgacaacatccgcatcggc
cgcccgggcgccacggatgccgaaatccgcacggcggcgcgcgccgccgcggcggagtcc
ttcatcgacgcgctgcccgagggcttcgccacccgggtggggccgggcgggcagcgcctg
tcgggcggccagcgccagcgcgtggccctggcccgcgcgctgctgcgcgacccgcgcgtg
ctgctgctggacgaggccaccagcgccctggacagcgagagcgaggccctggtccagcag
gcgctgggccagttgcgccaggggcggaccaccatcgtcgtggcccatcggctgtcgacc
gtacgctcggccgacctggtggtcgcgatggcgggcgggcagggggtcgaatgcggtacc
cacgcggccctgatggaagccgacgggttgtacgcccggatggtccggacacaggcattc
ggcgaagtcggcccgtaa
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