Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_3199
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Entry
Gdia_3199 CDS
T00798
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gdj03032
]
Gdia_3199
03036 Chromosome and associated proteins [BR:
gdj03036
]
Gdia_3199
03400 DNA repair and recombination proteins [BR:
gdj03400
]
Gdia_3199
DNA replication proteins [BR:
gdj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Gdia_3199
Chromosome and associated proteins [BR:
gdj03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Gdia_3199
DNA repair and recombination proteins [BR:
gdj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Gdia_3199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
ACI52929
UniProt:
A9H0B5
LinkDB
All DBs
Position
3504045..3504341
Genome browser
AA seq
98 aa
AA seq
DB search
MTKSELIAELAAANPHLLSRDVELIVQTIFSEISAALARGDRVELRGFGAFTVKKRDART
GRNPRTGEMVAVDEKVVPFFKAGKELRERVNNGAPAED
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcggagctgatcgccgaactggctgcggcgaatccgcaccttctcagccgc
gacgtggaattgatcgtccagacgatcttcagcgagatcagcgcggcgctggcccggggg
gaccgtgtggaactgcgcggcttcggggccttcacggtcaagaagcgtgacgcccgcacc
ggacgcaatccccgcaccggtgaaatggtggcggtggatgaaaaggtcgtccccttcttc
aaggccggcaaggaactgcgcgagcgcgtgaacaacggcgcccccgccgaggactga
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