Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_3318
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Entry
Gdia_3318 CDS
T00798
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gdj03009
]
Gdia_3318
Enzymes [BR:
gdj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Gdia_3318
Ribosome biogenesis [BR:
gdj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Gdia_3318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
TRAM
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
ACI53045
UniProt:
A9HRW8
LinkDB
All DBs
Position
complement(3626170..3627450)
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AA seq
426 aa
AA seq
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MTIEADIALLGTDGDGIARTAEGDRLFIPGALPGEHVLADRVDERTAHLTSILRPSPDRV
TPPCPLFGTCGGCAIQHLSLAAALDWKAGLVVHALERAGFAAPAITGTVQSPPGSRRRID
LAVRRRPEGVCIGLHARRGDVVDLTACPVLEPALFALLPALRAVMQSLGALRRDGDALIN
MLDSGPDLLLATDGPLEAADRAKLASFARDHRIPRIAWRRAGTTDVPETAAQTASVRHEL
SGVATMPPPGAFLQPTREGEAAIIAAVLAGLPRRLVRKDTVIELYAGCGTLSFALGQHVR
TLAFEGQPDAVATLRRATTGTRVVAEQRDLNRQPVMARQIADARAVVLDPPYTGAGAQMA
EIVAGRPERIVYVSCNPQALGRDAAGLQAAGYRLDGVTIIDQFLWSTEVEAVCVFTAPPA
PRRRTR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgaagccgatatcgcccttctgggcacggacggggacggcattgcccgcacc
gccgaaggcgaccgcctgttcatccccggcgcgctgccgggcgagcatgtcctggccgac
cgggtggacgaacgcaccgcccacctgacatccatcctgcggcccagcccggaccgggtg
acgccgccctgcccgctgttcggaacctgcggcggatgcgcgatccagcatctgtcgctg
gccgccgcgctggactggaaggccgggctggtcgtccatgcgctggagcgcgccggattc
gccgcccccgcgatcaccggaacggtccagagcccgcccggatcgcgccggcggatcgac
ctggcggtccggcgccggccggagggcgtatgcatcgggctgcatgcccggcgcggcgac
gtggtggacctgaccgcctgcccggtcctggaaccggcgctgttcgccctgctcccggcc
ctgcgtgccgtgatgcagtcgctgggggccctgcggcgcgacggtgacgccctgatcaac
atgctggattcaggccccgacctgctgctggcgaccgacggcccgctggaagcggcggac
cgtgccaagctggcgtcctttgcccgcgaccaccggattccccgcatcgcctggcgccgt
gcgggcacgacggacgtgccggaaaccgccgcccagaccgcgtcggttcggcatgaactg
tccggcgtcgccaccatgccgccgcccggcgcgttcctgcagccgacgcgcgagggcgag
gccgcgatcatcgccgccgtactggccggcctaccgcgccgactggtgcggaaggatacg
gtgatcgaactctatgccgggtgcggcacgctgtccttcgcgctggggcagcacgtgcgc
accctggcgttcgagggacagcccgacgcggtcgcgaccctgcgccgcgccacgacgggc
acgcgcgtggtcgccgaacagcgcgacctgaaccgccagccggtgatggcgcgccagatt
gccgacgcgcgggcggtggtgctggacccgccttataccggggccggggcgcagatggcc
gagatcgtcgccggccggccggagcgaatcgtctatgtcagttgcaatccgcaggcgctg
ggccgcgacgccgccggactgcaggcggcgggctatcgcctggacggcgtgacgatcatc
gaccagttcctgtggtcgaccgaggtcgaagccgtctgcgtcttcaccgccccacccgcc
ccccgccgccggacgcggtaa
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