Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_3354
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Entry
Gdia_3354 CDS
T00798
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj00260
Glycine, serine and threonine metabolism
gdj00460
Cyanoamino acid metabolism
gdj00630
Glyoxylate and dicarboxylate metabolism
gdj00670
One carbon pool by folate
gdj00680
Methane metabolism
gdj01100
Metabolic pathways
gdj01110
Biosynthesis of secondary metabolites
gdj01120
Microbial metabolism in diverse environments
gdj01200
Carbon metabolism
gdj01230
Biosynthesis of amino acids
gdj01240
Biosynthesis of cofactors
gdj04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Gdia_3354
09102 Energy metabolism
00680 Methane metabolism
Gdia_3354
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Gdia_3354
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Gdia_3354
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Gdia_3354
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Gdia_3354
Enzymes [BR:
gdj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Gdia_3354
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ACI53081
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All DBs
Position
3672797..3674095
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AA seq
432 aa
AA seq
DB search
MPDQMSQSGLHAYFRSPLAERDPLVAEIIAGELERQRDGIELIASENMVSEAVLQAQGSV
LTNKYAEGYPGRRYYGGCAEVDKVESLAIERVKTLFGAGFANVQPHSGANANQAAFMALV
SPGDTILGMSLAAGGHLTHGAAPNYSGKWFRAVQYGVRREDGLLDYEEMERLARAEKPKL
IVAGGSAYPRAIDFARFRAIADEVGAYLMVDMAHYAGLVAAGLYPSPMAHAHVVTSTTHK
TLRGPRGGLILTNDADLAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFRAYQEAV
AANARVLAETLLSRGFDIVTGGTDSHLLLVDLRPKKVTGRAAERSLERAGITANKNAVPF
DPEKPAITSGIRLGSPAATARGFGTDEFRAVGEMIDEVLTAMAGKGEDGCPATEQAVHDK
VRALCARFPIYR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgccggaccagatgagccagagcgggttgcacgcctatttccgctccccgcttgccgaa
cgcgatcccctggtcgcggagatcatcgcgggtgaactggagcgccagcgcgacggaatc
gaactgatcgccagcgagaacatggtgtccgaggcggtgctgcaggcgcagggcagcgtg
ctgacgaacaaatacgccgagggttatcccggccgccgctattacggcggctgcgccgag
gtggacaaggtcgagagcctggccatcgagcgggtgaagacgctgttcggcgcgggcttc
gcgaacgtgcagccccattccggcgccaacgcgaaccaggcggcgttcatggcgctggtc
agcccgggcgataccatcctgggcatgagcctggcggcgggcggccacctgacgcacggg
gcggcgccgaactattccggcaaatggttccgcgcggtgcagtacggcgtgcggcgcgag
gacgggctgctggattacgaggagatggagcgcctggcccgggccgagaagccgaagctg
atcgtggcggggggctcggcctatccgcgcgcgatcgatttcgcccgcttccgcgccatc
gcggacgaagtcggggcctacctgatggtcgacatggcccattatgccggactggtcgcg
gcgggcctgtatccctcgccgatggcgcatgcgcatgtggtgaccagcacgacgcacaag
accctgcgcggcccgcgcggcggcctgatcctgacgaatgacgcggacctggcgaagaag
atcaactcggcggtcttccccgggctgcagggcggcccgctgatgcacgtgatcgcggcc
aaggccgtggcgttcggcgaggcgctgcagccggaattccgcgcctatcaggaagcggtg
gcggcgaatgcccgcgtgctggcggaaacgctgctgtcgcgcgggttcgacatcgtgacg
gggggcacggacagccacctgctgctggtggacctgcgccccaagaaggtcacgggccgc
gccgccgaacgcagcctggaacgcgccgggatcaccgcgaacaagaacgcggtgccgttc
gacccggaaaagccggcgatcacgtcggggattcgcctgggcagccccgccgccacggcg
cgcggcttcggcaccgacgaattccgcgcggtgggcgagatgatcgacgaggtcctgacc
gccatggccggcaagggcgaggacggatgccccgccaccgaacaggcggtgcacgacaag
gtccgcgccctgtgcgcgcgcttcccgatctatcgctag
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