Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_3377
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Entry
Gdia_3377 CDS
T00798
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj00300
Lysine biosynthesis
gdj00470
D-Amino acid metabolism
gdj01100
Metabolic pathways
gdj01110
Biosynthesis of secondary metabolites
gdj01120
Microbial metabolism in diverse environments
gdj01230
Biosynthesis of amino acids
Module
gdj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Gdia_3377
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Gdia_3377
Enzymes [BR:
gdj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Gdia_3377
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ACI53103
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All DBs
Position
3699548..3700906
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AA seq
452 aa
AA seq
DB search
MTDPSSRLAEQDPTVADLLAARPHLSMHALDGLVFEDVPLNAIADAVGTPTWVMGAGTLR
ARYRRLAGALRDAGLAPSIHFAVKANDHLAVLRILAAEGAGADVVSGGELRRARAAGIPA
AGIVFSGVGKSRDELHLAVTEGIAHIAVESAEELDVVSDVAVAAGRTARITLRVNPDVDA
GTHEKITTGLSTNKFGIAYARAADLYARAAALPGLHPLGFSVHIGSQIVAMAPYRAAFAR
VADLVRAVRARGLSVGLVDCGGGLGIRYRDEVEGAPMALAGAIRAELGDLDVRLAIEPGR
WLAGPAGVLLSRVILRKAGQDGLPPFLILDAAMNDLARPSLYDSWHGILPLSARDAVQPV
ESVNVVGPVCESADSFATGRMLPRMGDGAAVALLDTGAYGMVMSSTYNGRPLAAQVLVDG
GRWSVIRARQPVESLWAADRVPDWLAPQPVGA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccatcttcccggctcgccgagcaggacccgaccgtggcagacctgctggcc
gcccgcccgcatctgtcgatgcatgcgctcgacggcctggtgttcgaggacgttccgctg
aacgcgatcgcggacgcggtgggaacgccgacctgggtcatgggggcagggaccctgcgc
gcgcgctatcgccgcctggcgggcgccctgcgtgacgcggggctggccccgtcgatccat
ttcgcggtgaaggcgaacgaccatctggcggtgctgcgcatcctggcggccgaaggggcg
ggggccgacgtcgtcagcggcggcgaactgcgccgcgcccgcgccgccggcattccggcg
gccggtatcgtcttttccggcgtcggcaagtcgcgggacgaactgcacctggccgtgacc
gagggcatcgcccacatcgcggtcgaaagcgccgaggaactggacgtcgtgtccgacgtc
gccgtcgcggccggccgcacggcgcgcatcacgctgcgggtgaacccggatgtggacgcc
ggaacgcacgagaagatcacgaccggcctttcgaccaacaagttcggcatcgcctatgcc
cgggccgccgacctgtatgcccgcgcggcggcgctgccgggactgcatccgctggggttc
tcggtgcatatcggcagccagatcgtggccatggccccctaccgcgccgcattcgcgcgg
gtggccgacctggtgcgcgcggtgcgggcgcgcggcctgtccgtcgggctggtcgattgc
ggcggcggcctgggaatccgctaccgtgacgaggtcgagggcgcgcccatggccctggcg
ggtgcgatccgcgccgaactgggtgacctggacgtgcgcctggcgatcgagcccggccgc
tggctggccggtccggccggcgtgctgctgtcgcgggtgatcctgcgcaaggccgggcag
gacgggctgccgccgttcctgatcctggacgcggcgatgaacgacctggcgcggcccagc
ctgtacgattcgtggcatggcatcctgccgctgtccgcccgtgacgcggtccagccggtc
gaatcggtgaacgtcgtgggaccggtctgcgaaagcgccgattccttcgccaccggccgg
atgctgccgcgcatgggtgacggcgcggcggtcgccctgctggataccggcgcctacggc
atggtcatgagctcgacctataacggccgcccgctggccgcgcaggtcctggtcgatggc
gggcgctggagcgtgatccgcgcccggcagccggtcgaaagcctgtgggcggcggaccgg
gttcccgattggcttgccccccagccggtgggggcctga
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