Gluconacetobacter diazotrophicus PA1 5 (JGI): Gdia_3398
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Entry
Gdia_3398 CDS
T00798
Name
(GenBank) succinyl-CoA synthetase, beta subunit
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
gdj
Gluconacetobacter diazotrophicus PA1 5 (JGI)
Pathway
gdj00020
Citrate cycle (TCA cycle)
gdj00640
Propanoate metabolism
gdj00660
C5-Branched dibasic acid metabolism
gdj00720
Other carbon fixation pathways
gdj01100
Metabolic pathways
gdj01110
Biosynthesis of secondary metabolites
gdj01120
Microbial metabolism in diverse environments
gdj01200
Carbon metabolism
Module
gdj_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gdj_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gdj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Gdia_3398
00640 Propanoate metabolism
Gdia_3398
00660 C5-Branched dibasic acid metabolism
Gdia_3398
09102 Energy metabolism
00720 Other carbon fixation pathways
Gdia_3398
Enzymes [BR:
gdj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
Gdia_3398
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
Citrate_synth_N
CPSase_L_D2
GARS_A
Ligase_CoA_2
Motif
Other DBs
NCBI-ProteinID:
ACI53124
UniProt:
A9HRF0
LinkDB
All DBs
Position
complement(3721495..3722709)
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AA seq
404 aa
AA seq
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MNIHEYQAKALLKGFGMPVPDGRVVRSPDEALLAARAMGAPLVVVKAQIHAGGRGAGHFA
HDPGGKGGVRLARTPEDAEQAAIAMLDQTLVTRQTGSAGRVVRRLYIEAGCDIGRELYLS
LLVDRGTGRIVIVASQDGGMAIEDVAAATPERILKEPIDPATGLSDYQARTLAARLDLHG
RSIRAFTTVLRAAYDAFVALDAAIVEINPLVVTRSGDLLALDAKMSFDDNALFRHPELEE
LRDENEEDPREREAARHGLAYVGLDGTIGCMVNGAGLAMATMDIIKMEGEEPANFLDVGG
GATRERVAAAFRILLSDRKVRGILVNIFGGIMRCDIIADAIVAASRETGLHVPLVVRLAG
TNVEQGHQILSASGLRIIPADDLADAATKIVAAVRETAFAGGAA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaacatacatgaatatcaggcaaaggccctgttgaagggcttcggcatgccggttccc
gatgggcgcgtcgtccgttccccggacgaagccctgctggccgcccgcgcgatgggtgcc
ccgctggtggtggtcaaggcgcagatccatgccggcggccgcggcgcgggtcatttcgcc
catgatcccggcggcaagggcggcgtacgcctggcccgcacgcccgaggatgccgagcag
gccgccatcgcgatgctggaccagaccctggtcacgcgccagaccggctctgccggccgc
gtggtccgccgcctgtatatcgaggccggatgcgatatcgggcgcgagctgtacctgtcg
ctgctggtggatcgcggcactgggcgcatcgtcatcgtggcgtcgcaggacggcggcatg
gcgatcgaggacgtcgccgccgccacgcccgagcgtatcctgaaggaaccgatcgacccg
gccaccggcctgtccgactaccaggcgcgcacgctggcggcgcggctggacctgcatgga
cgctcgatccgcgccttcaccaccgtgctgcgcgcggcctatgacgcgttcgtggcgctg
gacgccgcgatcgtcgagatcaatccgctggtcgtcacccggtcgggcgaccttctggcg
ctggacgccaagatgagcttcgacgacaacgcgctgttccgccatccggaactggaagaa
ctgcgcgacgagaacgaggaagacccccgcgagcgcgaggccgcgcgccacggcctggcc
tatgtcgggctggacgggaccatcggctgcatggtcaacggcgccgggctggcgatggcg
accatggacatcatcaagatggagggcgaggaaccggccaacttcctggacgtgggcggc
ggcgccacgcgcgaacgggtggcggcggcgttccgcatcctgctgtccgaccgcaaggtg
cgcggcatcctggtgaacatcttcggcggcatcatgcgctgcgacatcatcgcggacgcc
atcgtcgccgcgtcgcgcgaaacggggctgcacgtgccgctggtggtgcggctggccggc
accaacgtcgaacaggggcaccagatcctgtcggcatcggggctgaggatcatcccggcc
gacgacctggccgacgcggccaccaagatcgtcgccgccgtgcgcgaaaccgctttcgcc
gggggggccgcctga
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