Gloeocapsopsis dulcis: P0S91_12685
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Entry
P0S91_12685 CDS
T09511
Name
(GenBank) ribonuclease R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
gdu
Gloeocapsopsis dulcis
Brite
KEGG Orthology (KO) [BR:
gdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gdu03016
]
P0S91_12685
Enzymes [BR:
gdu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
P0S91_12685
Transfer RNA biogenesis [BR:
gdu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
P0S91_12685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-ProteinID:
WNN87197
LinkDB
All DBs
Position
complement(2660846..2662903)
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AA seq
685 aa
AA seq
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MEKGKLVEFRVQGDRRLGVVDRPDGKSRWIAIDERGLAHSLAPRQITYEVLGQTYKPSEI
PHFLEEVQIYLDPSSLEVAWELLVESGESVDPAQMAMLLFSEQNPPQCYAAHCLLSEDKL
YFKQKGNSYEPRSAAQVAERKHQIEVEANRQREQQDFLTRVSQAINGETVEWSRQDRQRI
EAIEKYATLLAECVRSGLTPDSLARTYSPPASVVETMNTLGRSATPQAAFELLVDLGIWS
VHENLFLRRSQISVQFPTKVLEVAQQRIDSPPPDPDRRLDLTRLKVYTIDDQSTSEIDDG
VSWELLVDGRQRLWIHIADPTRWLVPEDELDLDARKRGTTVYLPTGMIPMFPSALATGPM
SLLQGKVCCALSFGVVLDDSGAVQEYNIHASSIKPTYRLTYEDVDEMLELGVEAEPEITA
IAALARRRQMWRQSQGAVSINLPEAVIKVQDDEITIKVLNDSLARQLVAEMMILAGEVAG
HYAQVHKIALPFRGQPQPELPSDEELIQLPAGFARACAMRRCMPKSEMSTTPTRHAGLGL
STYTQATSPIRRYTDLLTHFQLKAHLRGETPPFSGEQIQEVMLSVTTVTQEATLVERQTN
RYWGLEYLRRHPNQVWQALVLMWLREDSRLALILIEDLGLQLPMVFKRGVGLGEQVSVKV
SYVDPRQDVLQFQEVTYSQAQQAAT
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagggaaagctagtcgaatttagagtgcaaggcgatcgccgacttggtgttgtt
gatcgtcctgatggtaaatcacgctggatcgcaatcgatgagcgcggtctagcgcacagt
ctagctccgcgacaaattacttacgaagttttgggtcaaacctacaaaccgtcagaaatt
ccgcactttctggaggaagtacagatataccttgacccttcaagcttagaagttgcttgg
gaattgttggtcgaaagcggcgaaagcgttgatccagcacaaatggcaatgttgttattt
tcagagcagaacccgccacaatgctatgctgctcattgcttactgtcagaagataaactg
tactttaagcaaaaaggaaatagctacgagccacggagtgcggcgcaagttgctgaacga
aaacatcagatcgaagtcgaagcaaatcgacagcgcgaacaacaagattttctgacacga
gtttctcaagcgatcaatggtgaaacagtcgaatggagtcgccaagatcgccagcgaatt
gaagccatagaaaagtatgcgacactactagcagaatgtgtgcgttcgggtttaactcca
gactcgctagcgcgtacttattctccacctgcttccgttgtagaaacaatgaatactttg
ggacgttctgccacaccacaagcagcttttgagttgctggttgatttgggtatttggagc
gttcacgaaaatttgtttttgcggcgcagtcaaatttcggttcagttccctactaaggtg
ttagaagtggctcaacagcgcatagattctccaccacctgacccagatcgtcgcctggat
ctgactcgtcttaaagtttacacaattgacgatcaaagcacgagcgaaattgatgatggt
gtcagttgggaattactcgtcgatggacgtcaaagattatggattcatattgccgatccc
acgcggtggttagttccagaagatgagcttgatttagatgcacgaaaacgcgggacaaca
gtttatttgccaacaggaatgatcccgatgttcccttctgcattggcaacaggaccaatg
agtttactacagggaaaagtttgttgtgctttaagttttggtgttgttttagatgactca
ggagcagtacaagagtataatatacacgcaagttcgatcaaacctacctaccgtctaacg
tatgaagatgtagacgaaatgttggagttgggggtagaagctgaaccagaaattacggcg
atcgctgctttagcccgacgtcgtcaaatgtggcgacaatcgcaaggagcagtgagcatc
aacttaccagaagccgtcatcaaagttcaagatgacgaaattacgatcaaagttctcaat
gattcgctagcgcgtcagttagtcgctgaaatgatgattttagcaggagaagttgctggt
cattacgcccaggtgcataaaattgctttaccatttcgcggtcagccacaaccagaatta
ccctctgacgaagagttaattcaattacccgcaggctttgctcgcgcttgtgcgatgcgc
cgttgtatgcctaaaagtgaaatgagcactacacctacacgtcatgcgggcttaggttta
tcaacttatacacaagcaacttcaccaattcggcgctatacagacttactcactcatttt
caattaaaagctcacttacgtggcgaaacacctccgttctctggagaacagatccaagaa
gtcatgttgagtgtgacgacagtgacccaagaagctaccttggtagaacgtcaaacaaat
cgctattggggtttagaatatttacgccgtcatcctaatcaagtttggcaagctttggtg
ttgatgtggctgcgagaagatagccgtttggcactgattttaattgaagatttgggattg
cagttgccaatggttttcaaacgcggtgttggtttaggcgaacaggtgtcagttaaagtc
agctacgtcgatccgcgtcaagatgtattgcagttccaggaagtgacttattcgcaagca
cagcaagcagctacttaa
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