KEGG   Gloeocapsopsis dulcis: P0S91_18560
Entry
P0S91_18560       CDS       T09511                                 
Name
(GenBank) RNA polymerase sigma factor SigF
  KO
K03090  RNA polymerase sigma-B factor
Organism
gdu  Gloeocapsopsis dulcis
Brite
KEGG Orthology (KO) [BR:gdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gdu03021]
    P0S91_18560
Transcription machinery [BR:gdu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     P0S91_18560
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_24 HTH_23 HTH_Crp_2 HTH_3 Sigma70_ECF HTH_17 KORA HTH_31 MarR_2 HTH_Tnp_ISL3 HTH_8 HTH_11 HTH_AsnC-type Xre-like-HTH Crp AbiEi_4 HTH_28 HTH_Tnp_4 Phage_CI_repr LacI
Other DBs
NCBI-ProteinID: WNN88277
LinkDB
Position
complement(3921291..3922076)
AA seq 261 aa
MVLSNTVNPKELKQTSATLLRDYEQGRSQTIRNQLVTLHLGLARKEAHYWSNQCTESYED
LLQVGCMGLIRAVERFELSKGHAFSSFAVPYIRGEIQHYLRDKGVMVRIPRRWLTLQQQA
VGVSQSLRQKYNRQPLDIEIAAALNVSVEEWQEVKLAWVNRAPLSLDMPIQESEEGTTCL
GEIVPDQDYRSFQLAQEDRIRLQQSLYQLEKRTHEILKFVFLYDLTQKEVAEHLGISVVT
VSRRVKKGLDCLKQLMVGTED
NT seq 786 nt   +upstreamnt  +downstreamnt
atggtgctaagtaataccgtaaatcctaaggaattgaagcaaacaagtgcaactctactg
cgagattacgagcaaggtcgttctcaaactatccgcaaccagctcgtcacccttcatctg
gggttagcgagaaaagaggcacactactggagtaaccaatgtacagaaagttatgaagac
ttattacaagtaggctgcatggggttaattcgggcagtggaacgctttgaattatctaaa
ggtcatgcctttagttcttttgcggttccttatattcggggagaaattcagcattatctg
cgagataaaggtgtcatggtgcgaattccacgccgttggttaactttacagcagcaagca
gtaggagtatcccaatcgctacgccagaaatataaccgccaaccattagatatcgaaatt
gcggcagcactaaatgtttcggttgaggaatggcaagaagtcaaactggcgtgggtaaat
cgcgctcccttaagcttagatatgcctattcaggaatctgaagaagggacaacctgttta
ggagaaatagttcccgatcaagattaccgtagctttcaactagcacaagaagaccgcatt
cgcttacaacaatctttgtatcagttagagaaacgcactcacgaaatcttgaaatttgtg
tttttatatgacttgacacagaaagaagtggcagaacacctaggcattagtgttgtcaca
gtttcacgtcgcgtgaaaaaaggactagattgtttgaagcagttaatggttgggacagaa
gattaa

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