Gloeocapsopsis dulcis: P0S91_21805
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Entry
P0S91_21805 CDS
T09511
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gdu
Gloeocapsopsis dulcis
Pathway
gdu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gdu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0S91_21805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gdu03019
]
P0S91_21805
03009 Ribosome biogenesis [BR:
gdu03009
]
P0S91_21805
Enzymes [BR:
gdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P0S91_21805
Messenger RNA biogenesis [BR:
gdu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P0S91_21805
Ribosome biogenesis [BR:
gdu03009
]
Prokaryotic type
rRNA helicases
P0S91_21805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
UvrD-helicase
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
WNN88871
LinkDB
All DBs
Position
4547941..4549335
Genome browser
AA seq
464 aa
AA seq
DB search
MNFSFESLGLSEARIRHLEKIGFTTATNIQAQAIPHLLAGRDVVGQSQTGTGKTAAFSLP
ILERIDPNQRSVQALILTPTRELAVQVREAISSFVGDQNVRVAAIYGGQSIDRQMLQLKR
GVQIVVGTPGRVIDLINRGSLQLNQINWMVLDEADEMLSMGFIDDVERILQTAPTERQTA
LFSATMPSTIRQLVTKFLRSPVTVTVEQPKAAPTRINQVAYLVPRHWSKARALQPILALE
DPESALIFVRTRKTAAELTNQLQAAGYSADEYHGDLTQQARERLLMRFRNKQVRWVIATD
IAARGLDVEDLTHVINYDLPDSVETYVHRIGRTGRAGKEGTAISLVQPFERRKQQLIERH
VRQSWKVLSIPTRAQIEARHLEKLQRQVQEVLSGERLASFLPIVRDLSNEYDVHAIAAAA
LQMAYDSSRPAWMQSEAATMEPEKSSAPKPVLRSPRSQSVSKNS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcctttgaaagcttgggtctttcagaagcacgtattagacatttagaaaaa
attggatttacaacagcgacaaatattcaagcgcaagcgattccccacttactagcaggg
cgcgatgttgtgggacaatctcaaactggtaccggaaaaacagccgcattttctttgcca
attctagagcgcatcgatcccaaccaaagatcagtgcaggctttgatcctgacaccaaca
cgagagttagcggtgcaggtaagagaagcgatttcaagctttgttggcgatcaaaacgtc
cgtgtagcagcaatttatggtggtcaatcaattgaccgacaaatgttgcaattaaagcgt
ggcgtccaaattgttgtcggtacacctggacgagtcattgatctcatcaaccgaggtagc
ttacagcttaatcaaatcaattggatggtattagatgaagccgatgaaatgctgagcatg
ggctttattgacgacgttgaaaggattttacaaactgcaccgacggaacggcaaacagcg
ttgttctccgcaacgatgccatcaacaattcggcaattagtaacgaagtttttgcgatcg
cctgtaacagtaacagtcgaacaaccaaaagctgcaccaacacgaattaatcaagtcgct
tacttagttccgcgccattggagtaaagcacgggcgttgcaacctattttggcgcttgaa
gatccggaatcagctttaatctttgtgcgcaccagaaagacagctgctgaactaacgaat
caattacaagcagccggttacagtgcagatgagtaccacggcgatctcactcagcaagcg
cgagaaagactgttaatgcgcttccgtaataagcaagtgcgctgggtaattgccactgat
attgcggcgcgtggtttggatgtagaagatttgacgcacgtcatcaactacgacttaccc
gatagtgtcgaaacgtatgtgcaccgcattggacgtactggacgtgcaggtaaagaagga
actgcgatttcgttggtacaaccatttgaacgacgcaagcagcaactaatcgaacgtcac
gttcgccagagttggaaggtgctttcgattcctacaagagcacaaattgaagcacgtcat
ctcgaaaaactgcaacgtcaagtgcaagaggtactttctggagaacgtttagcttcgttc
ttaccaattgtgcgcgatttaagtaatgaatacgacgtacacgcgatcgctgcagcagca
ctacagatggcgtacgattcgagtcgtcccgcttggatgcagtcagaagccgcaacaatg
gaacctgaaaaatcatcggcacccaaaccagttttgcgttcaccgcgatcgcaatcagta
tcgaaaaacagctaa
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