Geobacillus sp. 12AMOR1: GARCT_00006
Help
Entry
GARCT_00006 CDS
T03966
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gea
Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gea03032
]
GARCT_00006 (gyrA)
03400 DNA repair and recombination proteins [BR:
gea03400
]
GARCT_00006 (gyrA)
Enzymes [BR:
gea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GARCT_00006 (gyrA)
DNA replication proteins [BR:
gea03032
]
Prokaryotic type
DNA Topoisomerases
GARCT_00006 (gyrA)
DNA repair and recombination proteins [BR:
gea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GARCT_00006 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
Npun_R1517
Motif
Other DBs
NCBI-ProteinID:
AKM17389
LinkDB
All DBs
Position
6313..8790
Genome browser
AA seq
825 aa
AA seq
DB search
MAEHEQSRIREVNISQEMRSSFLDYAMSVIVSRALPDVRDGLKPVHRRILYAMHDLGMTA
DKPYKKSARIVGEVIGKYHPHGDAAVYDTMVRMAQDFNYRYMLVDGHGNFGSIDGDAAAA
MRYTEARMSKIAMELLRDINKDTIDYQDNYDGSEKEPVVLPSRFPNLLVNGSSGIAVGMA
TNIPPHQLGEVIDALLALSRNPEMTVADLMEYIPGPDFPTAGQIIGRSGIRKAYETGRGS
ITLRAKAEIEQHANGKETIIVSELPYQVNKAKLIERIAELVRERKIDGITDLRDESDRSG
MRIVIEVRRDANAKVVLNNLYKHTALQTSFGINMLALVDGEPKVLNLKECLEHYLNHQKT
VIRRRTAFELKKAEARAHILEGLRIALDHLDEVIDLIRRSRTTEIAREGLMERFSLSERQ
AQAILDMRLQRLTGLEREKIEQEYQELLRLIAELKAVLADEEKVLQIIRDELAEIKERFN
DERRTEIIAGAVEQFDDEDLIPHEHVVITLTHKGYIKRLPLSTYRSQKRGGRGVQGMHTA
EDDFVEHLLVTSTHDNVLFFTNKGKVYRAKGYEIPEFGRTAKGLPIINLLELDKDEWINA
MIPIENEFDNELYLVFATKQGIAKRSPLSAFAHIRNNGLIAIHLREGDELISVKLTDGKK
HLIIGTKRGMLIRFPETDVRTMGRSATGVKAISLDDGDEVVGMEILEDHHDVLVVTKKGF
GKRTPASEYRVQSRGGKGLKTCNVTERNGPVVAVTTVVGNEDLMVITTGGVLIRIAVSDI
SRTGRIAQGVKLIRLSGEDEHECVATVAKVPEEEKEEKEEEGHPA
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacatgaacaatcgcgcattcgcgaagtcaatatcagccaggaaatgcgctcg
tcgttccttgactacgccatgagcgtcatcgtttcccgcgccttgccggatgtgcgcgat
gggctgaaaccggtgcaccgccgcattttatatgccatgcatgacctcggcatgaccgct
gataaaccgtataaaaagtcagcccgcatcgtcggcgaagtgatcgggaaataccacccg
cacggcgacgccgccgtgtatgatacgatggtgcgcatggcgcaagacttcaactaccgg
tacatgctcgttgacgggcacggcaacttcgggtcgatcgacggcgatgcagcagcggcc
atgcgttacacggaagcccgcatgtcgaaaatcgccatggagctgttgcgcgacatcaat
aaagacacgatcgattaccaagataactacgacggttcagaaaaagaaccggttgtgctg
ccgtcacggtttccaaacttgcttgtcaatggttcgtcaggcattgccgttgggatggcg
acgaacatccctccgcatcagcttggcgaggtcatcgatgcgctgttggcgttaagccga
aacccggagatgaccgttgccgacttgatggaatacattcctggtccggatttcccgacg
gccgggcaaatcatcggccgcagcggcatccgcaaggcgtacgaaacgggacggggatcc
attacgttgcgcgccaaggctgaaattgagcagcatgccaatggcaaggaaacgattatt
gtaagcgaactcccctatcaagtgaacaaagcaaagctgattgaacggatcgccgaattg
gtgcgcgagagaaaaatcgacggcatcaccgatttgcgcgatgaatcggaccgaagcgga
atgcgcatcgttattgaagtgcggcgcgatgcgaacgcgaaggtcgtgttaaacaactta
tacaaacataccgccttgcagacgagttttggaatcaacatgctcgccttggtggatggc
gagccgaaagtgttgaacttaaaagaatgtttggagcactatttgaaccaccagaaaacg
gtcatccgccggcgaacggcctttgagctgaaaaaggctgaagcgcgcgcccatattctt
gaaggcttgcgcattgcccttgaccatttggatgaagtgatcgacctcatccgtcgttcg
cgaacgacagaaatagcgcgcgaagggttgatggagcggttttcgctcagcgaacggcag
gcgcaggcgatcctagatatgcgcctgcaacggctgaccggcctcgagcgggaaaaaatt
gaacaggagtatcaagagcttctccgcctcatcgctgagttgaaagcggtgttggctgac
gaagagaaagtattgcagatcattcgcgatgaactggccgaaatcaaagagcggtttaac
gacgagcggcgcacagagatcattgcgggggctgtcgaacagtttgacgacgaagactta
atcccgcacgaacatgtcgtcattacgctcacccataaaggatatattaagcgcctgccg
ttatcgacgtatcgaagccagaaacgcggcggccggggcgtgcaaggcatgcataccgcc
gaggatgactttgtcgaacatttgctcgtcacttctactcatgacaacgtgctgtttttc
acaaataaagggaaagtataccgggcgaaaggctatgaaattccggaattcggccgcacc
gccaaagggctgccgatcatcaacttgcttgagctcgacaaggatgaatggatcaacgcc
atgatccccattgaaaatgagtttgataatgagctttatctcgtgtttgcgacaaagcaa
gggatcgccaagcgctctccgctctcagctttcgcccacatccgcaacaatgggctcatc
gccattcacttgcgcgagggggatgagctgatttccgtcaagttgacggacggtaaaaaa
catttgattatcggcacgaaaagagggatgctcatccgttttccagaaacggatgtgcgg
acaatgggccgcagtgcgacgggggtcaaggccatctcactcgatgacggcgatgaagtc
gttggcatggaaatcttggaagaccatcatgatgttcttgttgtgacgaaaaaagggttc
ggcaaacgcaccccagcttcggagtatcgcgtgcaaagccggggcggcaaagggttgaaa
acgtgcaatgtcacggaacggaacggccctgttgttgcagtgacaacagtcgtcggcaat
gaagatttaatggtcattacgacaggcggcgtgctgatccgcatcgctgtcagcgatatt
tccaggacagggagaattgcccaaggcgtcaagctcattcgcctctcgggcgaagacgaa
catgagtgtgtagcgacagttgccaaagtgccagaggaagaaaaagaagagaaagaggaa
gaagggcatcccgcttaa
DBGET
integrated database retrieval system
