Geobacillus sp. 12AMOR1: GARCT_00016
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Entry
GARCT_00016 CDS
T03966
Symbol
pdxS
Name
(GenBank) Pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea00750
Vitamin B6 metabolism
gea01100
Metabolic pathways
gea01240
Biosynthesis of cofactors
Module
gea_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
GARCT_00016 (pdxS)
Enzymes [BR:
gea01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
GARCT_00016 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
IMPDH
IGPS
NMO
TetR_C_27
NanE
FMN_dh
DUF188
DUF2795
Motif
Other DBs
NCBI-ProteinID:
AKM17394
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Position
20256..21140
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AA seq
294 aa
AA seq
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MALTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVAR
MADPTIIEEVMNAVSIPVMAKVRIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQ
FTVPFVCGCRDLGEAARRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQIRKVVSMSED
ELVAEAKQLGAPVEVLREIKRLGRLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFK
SENPEKYARAIVEATTHYEDYELIAHLSKGLGGAMRGIDVATLLPEHRMQERGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttggcattgacaggtacagaccgcgtcaaacgcggcatggcggaaatgcaaaaaggcggc
gtcattatggacgtcgtcaatgcggagcaagcgaagattgctgaggcggcaggggctgtc
gcagtcatggcgctcgagcgcgtcccggcagacattcgcgccgctggcggtgtcgcgcgc
atggctgatccgacgatcattgaagaagtgatgaacgctgtatcaatcccagtcatggca
aaagtgcgcatcgggcattatgtggaagcgcgcgtccttgaggcgctcggcgtcgactat
attgacgaaagtgaagtattgacgccggctgatgaagagttccatattgacaaacggcag
tttacggtcccatttgtatgcggttgccgcgacttaggagaggccgcccgccgcattgct
gaaggggcatcgatgttgcggacaaaaggggagccagggacaggaaacatcgtcgaggcc
gttcgccatatgcgcaaagtcaacgcgcaaatccgcaaagttgtcagcatgagcgaagac
gaacttgtcgccgaggcgaaacagcttggggctccggttgaagtgctgcgtgaaatcaaa
cggcttggccgcctcccggtcgtcaacttcgccgctggcggtgtcgcgacaccagctgac
gccgcgctcatgatgcacttaggcgccgacggtgtcttcgtcggttcgggcatttttaaa
tcggaaaatccggaaaaatacgctcgtgcgatcgttgaagcgacgactcattatgaagac
tatgagctgatcgcccatctatcgaaagggctgggcggcgcaatgcgcggcatcgatgtc
gcgacactgctgccggagcatcggatgcaagaacgaggctggtaa
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