Geobacillus sp. 12AMOR1: GARCT_00021
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Entry
GARCT_00021 CDS
T03966
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea03030
DNA replication
gea03430
Mismatch repair
gea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GARCT_00021 (dnaX_1)
03430 Mismatch repair
GARCT_00021 (dnaX_1)
03440 Homologous recombination
GARCT_00021 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gea03032
]
GARCT_00021 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
gea03400
]
GARCT_00021 (dnaX_1)
Enzymes [BR:
gea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GARCT_00021 (dnaX_1)
DNA replication proteins [BR:
gea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GARCT_00021 (dnaX_1)
DNA repair and recombination proteins [BR:
gea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GARCT_00021 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_30
TIP49
RCF1-5-like_lid
AAA_22
AAA_assoc_2
DnaX_C
AAA_16
AAA_19
AAA_5
PIF1
Rad17
AAA_7
AAA_14
DUF815
Mg_chelatase
DUF5789
TsaE
Motif
Other DBs
NCBI-ProteinID:
AKM17399
LinkDB
All DBs
Position
25934..27616
Genome browser
AA seq
560 aa
AA seq
DB search
MAYQALYRVFRPQRFADMVGQEHVTKTLQSALLQHKISHAYLFSGPRGTGKTSAAKVFAK
AVNCEQAPAAEPCNECPACLGITNGTIPDVLEIDAASNNRVDEIRDIREKVKFAPTSVRY
KVYIIDEVHMLSIGAFNALLKTLEEPPKHVIFILATTEPHKIPATIISRCQRFDFRRIPL
ASIVSRLKYVANAQGVEASDEALSAIARAADGGMRDALSLLDQAISFSDGKLRLDDVLAM
TGAASFAALADFIAAIHRKDTAAVLQQFEAMMAQGKDPNRLVEDLILYYRDLLLYKTAPH
VEGAIQIAVVDEAFTSLSEAIPLSDLYGAIELLNKSLQEMKWTNHPRLLLEVALVKLCHQ
PAAAAPSPTASELGPLIKRIETLEIELRRLKEQAPAVPPEAPSAKKTAKAVKTGGYKAPV
GRIYELLKQATHEDLALVKGRWADVLDALKRQHKVSHAALLQESEPVAASASAFVLKFKY
EIHCKMATDPASSVKENVEAILFDLTNRRFEMIAIPEEEWGKIREEFIRSKEAKAEKSQE
DPLIAEAKRLFGEELIEIKE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtggcataccaagcgttataccgtgtttttcggccgcagcgtttcgcggacatggtcggc
caagaacacgtgacgaaaacgttgcaaagcgccctgcttcaacataaaatatcgcatgcc
tacttattttccggaccgcgtgggacaggcaaaacgagcgcggcgaaagtgttcgccaag
gcggtcaactgtgaacaggccccggcggccgagccgtgcaatgaatgtcccgcttgcctc
ggcattacaaacggaacgattcccgatgtgttggaaattgacgctgcttccaacaaccgc
gtcgacgaaatccgcgacatccgtgaaaaagtgaaatttgcgccgacctcggtccgttat
aaagtgtacattatcgacgaagtgcacatgctgtcaatcggcgcgtttaacgcgttgttg
aagacgcttgaggaaccgcccaaacacgtcattttcattttggccaccaccgagccgcat
aaaatcccggcgacgatcatttcccgctgccaacggttcgattttcgccgcatcccgctg
gcctccatcgtttcgcggttgaaatatgtggcgaacgcccagggcgtagaagcatccgac
gaggcgctgtcggctatcgcccgcgctgccgatggagggatgcgcgacgcgctcagtttg
cttgaccaggcgatttcattcagcgatgggaagcttcggcttgatgacgtgctggcgatg
accggagcggcatcatttgccgcgttggctgatttcattgccgccattcatcggaaagat
acagcggctgttttgcaacagtttgaagcaatgatggcgcaaggaaaagatccgaatcgt
ttggttgaagatttgattttgtattatcgcgacttgttgctgtacaaaacggcccctcat
gtggaaggagccatccaaattgcggtcgttgacgaagcgttcacctcgctttcggaagcg
attcctctttccgatttgtacggagcgattgagctgttgaacaaaagcctgcaggagatg
aagtggacgaaccacccgcgtcttctcctcgaagtggcgctcgtcaagctttgccatcag
ccagcggctgctgctccatcgccgaccgcttctgaacttgggccattgatcaagaggatt
gaaacgctggaaatcgagctgcgccgcctaaaagagcaggcgcctgccgtcccgccggag
gcgccttctgcgaaaaaaacggcgaaagcggtgaaaaccgggggatataaagcaccggtc
ggccgcatttacgaattgttgaagcaggcgacgcatgaagacttagccttggtgaaaggc
cgctgggccgacgtacttgatgcgctgaagcggcagcataaagtgtcgcacgccgctctc
ttgcaggagagtgaaccggtcgcagcaagcgcttcagcatttgtgttaaagtttaagtat
gaaattcactgcaagatggcgaccgacccggcgagttcggtcaaggaaaatgtcgaagca
attttatttgacctgacgaaccgccgttttgaaatgatcgccattccggaagaggaatgg
gggaaaataagggaagaatttatccgcagcaaagaagcgaaagcggaaaaaagccaggaa
gacccgttgatcgccgaagcgaaacggctgtttggcgaggaattgattgaaatcaaagaa
taa
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