Geobacillus sp. 12AMOR1: GARCT_00104
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Entry
GARCT_00104 CDS
T03966
Name
(GenBank) hypothetical protein
KO
K04485
DNA repair protein RadA/Sms
Organism
gea
Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gea03400
]
GARCT_00104
DNA repair and recombination proteins [BR:
gea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GARCT_00104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
DnaB_C
Rad51
nSTAND_NTPase5
AAA_22
AAA_16
nSTAND3
AAA_24
SLFN-g3_helicase
RecA_N
AAA
AAA_30
NTPase_1
AAA_14
DAP3
NPHP3_N
AAA_5
MCM
ABC_tran
ATPase_2
zf-RING_10
AAA_29
Glyco_transf_N
AAA_18
NACHT
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AKM17463
LinkDB
All DBs
Position
101102..102475
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AA seq
457 aa
AA seq
DB search
MAKKKTKFVCQECGYESAKWLGRCPGCQTWNSFVEEIEPVRTAVRGAFLHSEPSGSAKPV
PITAVAAVQEPRIETNSAEFNRVLGGGIVKGSLVLIGGDPGIGKSTLLLQASAQLAAAGH
TVLYVSGEESVKQVKLRAGRLRAESDHLYVLAEANLEYIVSAIETIQPACVVIDSIQTVY
RTDITSAPGSVAQVRECTAELMKIAKTKGVAIFIVGHVTKEGAIAGPRILEHMVDTVLYF
EGERHHTYRILRAVKNRFGSTNEIGIFEMRDIGLREVENPSEVFLEERSHGAAGSTVVAA
MEGTRPVLVEIQALVSPTSFGNPRRMATGLDHNRVSLLMAVLEKRVGLLLQNQDAYLKVA
GGVKLDEPAIDLAIAVSIASSFRDRPTNPADVIIGEVGLTGEVRRVSRIEQRVQEAVKLG
FSRVIVPKNNLAGWQPPASVQVIGVSHVAEAIEHTMI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaagaagacgaaatttgtttgccaagagtgcggatacgaatcggcgaagtgg
ctcggccgctgcccgggatgccaaacgtggaactcattcgtcgaggaaatcgagccggtc
agaaccgctgtgcgtggggcgtttctccattcggagccgtccgggtccgctaaaccggtt
ccgattaccgccgttgccgcggtgcaagagccgcgcatcgaaacgaacagtgcagagttc
aatcgcgtgctcggtggggggatcgtcaaagggtcgctcgtcttaatcggcggcgacccc
ggcatcggcaagtcgacgctgttgctgcaggcctcagcgcaactggcggcggctgggcat
acagtgttgtatgtatcgggcgaggaatccgtcaaacaggtaaaactgcgcgctgggcgc
cttcgcgccgagtccgatcatctgtatgtgttagcggaggcgaatttggaatatattgta
tcagcgattgaaacgattcagcccgcctgtgtcgtgattgattcaatccagacggtgtac
cggacggatattacgtcagcgccgggcagtgtcgcccaagtgcgcgagtgcaccgctgag
ttgatgaaaatcgccaaaacaaaaggcgtcgccatttttatcgtcggccatgtgacgaaa
gaaggggcgatcgccgggccgcgcattctcgagcatatggtcgataccgtcctttatttt
gagggggagcggcatcatacgtaccgcattttgcgggcggtgaaaaaccgcttcggttcg
acgaatgaaatcggtatttttgaaatgcgcgacatcgggctgcgggaagtggaaaatccg
tccgaagtgtttttggaagagcgatcgcacggggcggcgggttcgacggtggtggcggcc
atggaagggacgcgcccggttctggtggaaattcaagcgctcgtttcgccgacaagcttc
ggcaacccgaggcggatggcgaccggcctcgatcataaccgcgtgtcgttgcttatggcc
gtattggaaaagcgggtcgggctgctgttgcaaaaccaagatgcctatttgaaggtggcg
ggcggagtgaagcttgatgagccggccattgacctagccatcgccgtcagcatcgcctca
agctttcgcgatcggccgaccaatccggccgacgtcattatcggtgaagtcgggttgacc
ggggaagtgcggcgtgtctcccgcattgaacagcgtgtgcaagaggctgtcaaactaggt
ttttcccgtgtcattgtaccgaaaaacaatttggcaggttggcagccgccggcaagcgtt
caggtgatcggcgtttcccatgtggccgaggcgatcgagcacacgatgatttga
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