Geobacillus sp. 12AMOR1: GARCT_00303
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Entry
GARCT_00303 CDS
T03966
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GARCT_00303 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gea03019
]
GARCT_00303 (groL)
03110 Chaperones and folding catalysts [BR:
gea03110
]
GARCT_00303 (groL)
03029 Mitochondrial biogenesis [BR:
gea03029
]
GARCT_00303 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gea04147
]
GARCT_00303 (groL)
Enzymes [BR:
gea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GARCT_00303 (groL)
Messenger RNA biogenesis [BR:
gea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GARCT_00303 (groL)
Chaperones and folding catalysts [BR:
gea03110
]
Heat shock proteins
HSP60 / Chaperonin
GARCT_00303 (groL)
Mitochondrial biogenesis [BR:
gea03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GARCT_00303 (groL)
Exosome [BR:
gea04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GARCT_00303 (groL)
Exosomal proteins of other body fluids (saliva and urine)
GARCT_00303 (groL)
Exosomal proteins of breast cancer cells
GARCT_00303 (groL)
Exosomal proteins of colorectal cancer cells
GARCT_00303 (groL)
Exosomal proteins of bladder cancer cells
GARCT_00303 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AKM17637
LinkDB
All DBs
Position
283087..284706
Genome browser
AA seq
539 aa
AA seq
DB search
MAKEIKFSEEARRAMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDPFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLKNVAAGANPMGIRRGIE
KAVAVAVEELKAISKPIKGKESIAQVAAISAADEEVGQLIAEAMERVGNDGVITLEESKG
FTTELDVVEGMQFDRGYVSPYMITDTEKMEAVLENPYILITDKKVSSIQELLPVLEQVVQ
QGRPLLIIAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAILTGGEVIS
EELGRELKSTTIASLGRASKVVVTKETTTIVEGAGDSDRIKARINQIRAQLEETTSEFDR
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTALMNV
YSKVAAIEAEGDEATGVKIVLRAIEEPVRQIAQNAGLEGSIIVERLKNEKPGIGFNAATG
EWVDMIEAGIVDPTKVTRSALQNAASVAAMVLTTEAVVADKPEENKGGNPGMPDMGGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaaattaagttcagcgaagaagcgcgccgtgcgatgttgcgcggggtggac
aaactcgcagacgcagtgaaagtcacattaggtccgaaaggccgcaacgtcgtattggag
aaaaaattcggttctccgctcatcacgaacgacggggtaacgatcgcgaaagaaatcgaa
ctcgaagacccgtttgaaaacatgggcgcgaaactggtcgctgaagtcgccagcaaaacg
aacgacatcgctggggacgggacgacaacggctaccgtattggctcaagcgatgatccgt
gaaggattgaaaaacgtggcagccggcgccaatccgatgggcatccgccgcgggattgaa
aaagcggtagcggtagcggttgaagaattaaaagccatctccaaaccgatcaaaggaaaa
gaatcgatcgcccaagtggctgcgatctcggctgctgacgaagaagtcggccaattgatc
gctgaagcgatggaacgcgtcggcaatgacggcgtcatcacgcttgaagaatcgaaaggc
ttcacgacggaactcgacgttgtcgaagggatgcaattcgaccgcggttacgtttcgccg
tacatgattacggatacggaaaaaatggaagctgttctcgaaaatccgtacatcttgatt
acggacaaaaaagtatcgagcatccaagagctgttgccggtcttagaacaagtcgtccaa
caaggccgtccgctcttgatcattgcggaagatgtcgaaggcgaagcactcgcaacgctt
gttgtcaacaaactgcgcggcacgttcaatgcggtagctgtcaaagcgcctggctttggc
gatcgccgcaaagcgatgctcgaagacatcgcgattttgacaggcggcgaagtcatctcc
gaagagcttggccgtgaactgaaatcgaccacgatcgcttcgctcggccgtgcgtcgaaa
gtggttgttacgaaagaaacgacgacgatcgtcgaaggcgctggcgattcggaccgcatc
aaagcgcgcatcaaccaaatccgtgcgcagcttgaagaaacgacgtccgaattcgaccgc
gaaaaactgcaagaacgcttggcgaaactcgctggcggcgtagcggtcatcaaagttggc
gcagcgacagaaacggaattgaaagaacgcaaactgcgcattgaagatgcgctcaactcg
actcgtgctgcggttgaagaaggcattgtcgctggcggtggcacggcgttgatgaacgtc
tacagcaaagttgcggccatcgaagcggaaggcgatgaagcaacgggtgtgaaaatcgtc
ttgcgcgcgatcgaagaaccggttcgtcaaatcgcgcaaaacgctggtctggaaggctcg
atcatcgttgagcgcctgaaaaatgaaaaaccgggcatcggcttcaacgcggcaacaggc
gaatgggtcgacatgatcgaagctggtatcgttgacccgacgaaagtcactcgctcggcg
ctgcaaaacgctgcctctgtcgccgccatggtcttgacgacagaagcggtcgttgccgac
aaaccggaagaaaacaaaggcggcaatccgggcatgccggatatgggtggcatgatgtaa
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