Geobacillus sp. 12AMOR1: GARCT_00335
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Entry
GARCT_00335 CDS
T03966
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea03420
Nucleotide excision repair
gea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GARCT_00335 (pcrA)
03430 Mismatch repair
GARCT_00335 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gea03400
]
GARCT_00335 (pcrA)
Enzymes [BR:
gea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GARCT_00335 (pcrA)
DNA repair and recombination proteins [BR:
gea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GARCT_00335 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
GARCT_00335 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
AAA_22
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AKM17666
LinkDB
All DBs
Position
320134..322308
Genome browser
AA seq
724 aa
AA seq
DB search
MNFLSEQLLAHLNKEQQEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKQVAPWNIL
AITFTNKAAREMRERVQSLLGGAAEDVWISTFHSMCVRILRRDIDRIGINRNFSILDPTD
QLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQFAKRASTYYEKVVSDVYQEY
QQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYKFQYIHIDEYQDTNRAQYTLVKKLA
ERFQNICAVGDADQSIYRWRGADIQNILSFERDYPNAKVILLEQNYRSTKRILQAANEVI
EHNVNRKPKRLWTENPEGKPILYYEAMNEADEAQFVAGRIREAVERGERRYRDFAVLYRT
NAQSRVMEEMLLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPKR
GIGASTIDKLVRYAAEHELSLFEALGELEMIGLGAKAAGALAAFRSQLEQWTQLQEYVSV
TELVEEVLDKSGYREMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSLIAFLTDLAL
ISDLDELNGTEQAAEGDAVMLMTLHAAKGLEFPVVFLIGMEEGIFPHNRSLEDDDEMEEE
RRLAYVGITRAEEELVLTSAQMRTLFGNIQMNPPSRFLNEIPAHLLETASRRQAGASRPA
VSRPQASGAVGSWKVGDRANHRKWGIGTVVSVRGGGDDQELDIAFPSPIGIKRLLAKFAP
IEKV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaactttttatcggaacagctgctcgcccatttaaacaaagagcaacaagaagccgtc
aggacgacggaaggcccgctgctcattatggcgggggcgggaagcgggaaaacgcgggtg
ttgacgcaccgcatcgcctatttgatggcggaaaaacaggtggcgccgtggaacattttg
gccattacgtttacgaacaaggcggcgcgcgaaatgcgggaacgtgtgcagtcgctctta
ggtggggcggcggaagacgtctggatttcgacgttccactcgatgtgcgtccgcattttg
cgccgcgacattgaccgcatcggcatcaaccgcaatttttccatccttgatccgacggac
cagctttcggtcatgaaaacgattttaaaagaaaaaaacatagacccgaaaaaatttgag
ccgcggacgattttaggcacgatcagcgcggcgaaaaacgagctgttgcctccggagcaa
ttcgcgaagcgggcctcgacgtattacgaaaaagtcgtcagcgatgtgtatcaagaatac
caacagcgcctgcttcgcaaccattcgctcgattttgacgatttgatcatgacgacgatc
caactgtttgaccgcgtgccggatgtgcttcactattaccaatataagtttcagtacatc
catattgatgagtaccaggatacgaaccgcgctcaatatacgctggtcaaaaagctggcg
gaacgctttcaaaacatttgcgccgtcggcgacgccgaccaatcgatttatcggtggcgc
ggggcggacatccaaaacattttgtcgttcgagcgcgactatccgaacgcaaaagtcatt
ttgcttgagcaaaactaccgctcgacgaagcgcattttgcaagcggcgaacgaagtcatc
gagcataacgtcaaccggaagccgaaacggctttggacggaaaacccggaaggaaagccg
attctttattatgaggcgatgaacgaagcggacgaagcgcagtttgtcgctggacgcatc
cgcgaggcggtggagcgcggcgaacgtcgctaccgtgattttgctgtcttgtaccggacg
aacgcccagtcgcgtgtcatggaggaaatgttgctgaaagcgaacattccgtatcaaatt
gtcggcggcttaaagttctatgaccggaaagaaattaaagacattctcgcctatttgcgc
gtcatcgccaatccggacgatgatttaagcttgcttcgcatcattaacgtgccaaaacgc
ggcattggcgcctcgacgatcgacaaactcgtccgctatgcggccgagcatgagctgtcc
ttgtttgaggcgctcggcgagctagagatgatcgggcttggcgccaaagcggccggggcg
ctcgccgcgttccgcagccagctcgagcaatggacgcagctgcaagaatacgtctccgtc
accgaactcgtcgaagaagtgctcgacaaatcgggctaccgcgagatgctcaaggcggag
cggacgattgaagcacaaagccggctcgagaacttggatgagtttttgtcggtgacgaag
cattttgaaaatgtgagcgacgataaatcgctcatcgcctttttaaccgacttggcgctc
atttccgatttggacgagctgaacgggacggaacaggccgctgaaggagatgccgtcatg
ttgatgacgttgcatgccgccaaagggctcgagtttccggtcgtctttttgatcggcatg
gaagaaggcattttcccgcacaaccgctctctcgaggatgacgatgagatggaagaagaa
cggcggctggcgtacgtcggcatcacccgcgcggaggaagaacttgtgctgacgagcgcg
caaatgcggacgctgtttggcaacatccaaatgaacccgccgtcgcgctttttgaatgaa
attccggcgcatttgcttgagacagcctcgcgccgccaagcgggcgcctcccgcccggcc
gtttcgcgcccgcaggcaagcggcgccgtgggatcgtggaaagtcggcgatcgggcgaac
caccggaaatggggcatcggcaccgtcgtcagcgtccgcggcggcggcgacgaccaagag
ctcgacatcgccttcccgagcccgatcggcattaaacggctgcttgccaaatttgcgccg
attgagaaagtgtag
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