Geobacillus sp. 12AMOR1: GARCT_00494
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Entry
GARCT_00494 CDS
T03966
Name
(GenBank) Putative formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea00630
Glyoxylate and dicarboxylate metabolism
gea00680
Methane metabolism
gea01100
Metabolic pathways
gea01120
Microbial metabolism in diverse environments
gea01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GARCT_00494
09102 Energy metabolism
00680 Methane metabolism
GARCT_00494
Enzymes [BR:
gea01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
GARCT_00494
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
NADH-G_4Fe-4S_3
Fer4
Fer4_7
Fer4_2
Fer4_6
Fer4_8
Fer4_10
Fer4_21
Fer4_9
Fer4_18
Fer4_15
Fer4_NDSU1
Fer4_4
Motif
Other DBs
NCBI-ProteinID:
AKM17820
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Position
complement(490658..493621)
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AA seq
987 aa
AA seq
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MEAQMVTVTINGRAYRAKPGMTILEVVNEHGLPHPQVCYTPELGAIQTCDTCIAEVNGTL
LRACATPVEDGMVVELGSPRAKAAQKEAMDRLLENHLLYCTVCDNNNGNCKLHNTAEMMQ
IEHQTYPYRPKVDPSEVDMSHPFYRYDPNQCIACGQCVEACQNLQVNETLSIDWSAERPR
VVWDGGVPINESSCVSCGHCVTVCPCNALMEKSMLGEAGFMTGLDKDVLNPMIDFVKEVE
PNYTAIFAVSEIEAAMREQRIKKTKTVCTFCGVGCSFEVWTKGRKILKIQPVSEAPVNAI
STCVKGKFGWDFVNSEERLTKPLIRKGDVFVESTWDEALDLVAEKLGAIKRQYGGNAIGF
ISSSKISNEENYLMQKLARQVFETNNVDNCSRYCQSPATDGLFRTVGMGGDSGTIHDIAS
AGLVIIIGANPAEGHPVIATRVKRAHKLFGQKLIVADLRRNEMAERADLFIRPKQGTDQV
WLMAVTKYIIDQGWHDEAFIRERVHFFEEFKQLLEKYTLDYAEQVTGVAKADLIRIAEMI
HEADGTCVLWGMGVTQNTGGSDTSAAISNLLLATGNYGRPGAGAFPLRGHNNVQGACDMG
SLPAWLPGYQHVTDDAARAKFEKAYGVRIDAKPGLDNIQMLEAAERGELKAMYIVGEDMA
LVDCNANHVQETLAKLDFVVVQDIFLSKTAQFADVILPAAPNLEKEGTFTNTERRIQRFY
QALEPLGDSKPDWWIIQEIAKRLGADWNYAGPKEIMDEIASLAPLYSQAHYDRLEGWNSL
CWGSYDGADTPLLYKERFNFPDGKARFALADWVEPVQYPEEYDLLVNNGRLLEHFHEGNL
TYKSKGIEHKFPEVFVEVSPELAKERGIEDGALVRLISPYGRVKVRVLVTDRVRGNELFL
PMHSMANESAINILTGPQTDHRTNTPAYKQTRVRMEVIERSGDTPLPRTNPRFKQRHPQN
GVEVERKWQRRDYVPLTDEEKGVKVGG
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcaaatggtgacggtaaccatcaacgggcgtgcctaccgcgccaagcccggg
atgacgattttggaagtcgtcaatgagcacggtctgccgcatccgcaagtttgttatacg
ccggagcttggcgccattcagacatgcgacacgtgcatcgctgaagtcaacggaacgctg
cttcgcgcctgtgcgacgccggttgaggacggcatggtcgtcgaactcggctcgccgcgg
gcaaaggcagcgcaaaaagaagcgatggaccgcctgttggaaaatcatctcttgtactgt
acggtgtgcgacaacaacaacggcaactgcaagctgcacaacacggcggaaatgatgcaa
attgaacatcaaacatacccgtaccggccgaaagtcgatccgtccgaagtcgacatgtcc
catccgttttaccggtatgacccgaaccaatgcatcgcctgcgggcaatgcgtagaagcg
tgccaaaacttgcaagtgaacgagacgctgtccattgactggagcgccgagcggccgcgc
gtcgtctgggacgggggcgtgccgatcaacgagtcgtcgtgcgtcagctgcgggcattgc
gtcaccgtctgtccgtgcaacgccttaatggaaaaatcgatgctcggcgaagccggattt
atgacggggctggacaaagacgtgctcaatccgatgatcgatttcgtcaaagaagtggag
ccgaattacaccgccattttcgccgtttccgaaattgaagccgccatgcgcgaacaacgg
atcaaaaagacgaaaacggtttgcacgttctgcggtgtcggctgttcgtttgaagtgtgg
acgaaagggcggaaaattttaaaaatccagccggtttctgaagcgccggtcaacgccatt
tcgacatgcgtcaaagggaaattcggctgggatttcgtcaacagcgaagagcgcctgacg
aaaccgctcatccgcaaaggcgacgtcttcgtcgagtcgacatgggacgaagcgctcgac
ctcgttgccgaaaaattgggcgcgatcaagcggcaatacggcggcaacgccatcgggttt
atttcgtcatcaaaaatttccaacgaagaaaactatttaatgcaaaaactggcgcggcaa
gtatttgaaacgaacaatgtcgacaactgttcgcgctactgccaatcgccggcaaccgac
ggcctgttccgcacggtcggcatgggcggcgactccggcacgattcatgacatcgcttct
gcaggtctagtcatcatcatcggcgccaacccggcggaagggcatccggtcattgccacc
cgcgtcaaacgggcgcataaactgtttggccaaaaactcattgttgcggacttgcgccgc
aatgaaatggccgagcgggctgatttgttcatccgccccaaacaaggcaccgaccaagta
tggctgatggccgtgacgaaatacatcatcgaccaaggctggcacgatgaggcgttcatt
cgcgaacgcgtccatttctttgaagagtttaaacaattgctggaaaaatatacgcttgat
tatgccgaacaagtcaccggcgtcgccaaagccgatctcatccgcatcgccgaaatgatc
catgaagcggacggcacgtgcgtcctctggggcatgggggtcacgcaaaacacaggcggc
agcgacacatcggcggcgatttccaacttgcttttggcaaccggcaactatggccgtcca
ggggcgggcgcgttcccattgcgtggtcataacaacgtccaaggggcgtgcgacatgggg
tcgcttccagcttggctgccgggctaccaacatgtgaccgatgatgcggcgcgagcaaaa
tttgaaaaagcgtacggcgtccgcattgatgcgaaaccaggccttgacaacatccaaatg
ctcgaagcggccgagcgcggcgaactgaaagcgatgtacatcgtcggcgaagacatggcg
ctcgtcgactgcaacgccaaccacgtgcaagagacgttggcgaaacttgattttgtcgtc
gtccaagacattttcttatccaaaacagcgcaatttgctgatgtcatcttgccagcggcg
ccgaacttggagaaagaaggaacattcacgaataccgagcgccgcatccaacggttttat
caagcgctcgaaccgctcggcgattcaaaaccggactggtggatcattcaagaaatcgcg
aagcggcttggcgccgattggaattacgctggcccgaaagaaatcatggatgaaatcgcc
agcctcgccccactgtactcacaagcgcattacgaccggctcgaaggctggaacagctta
tgctggggcagctatgatggcgccgatacgccgctgttgtacaaagagcggttcaatttc
ccggacggcaaggcccgctttgcgttagccgattgggtcgaaccggtgcaatatccggaa
gagtacgatttgctcgtcaacaatggccgattgctcgaacatttccatgaaggaaacttg
acgtacaaatccaaaggcatcgagcataaattcccagaagtgtttgtcgaagtatcccct
gaactcgccaaagaacgcggcattgaagatggggcgctcgttcggctcatctcgccgtac
ggccgcgtcaaagtgcgcgtgctcgtcaccgatcgagtcagaggcaatgaactgttcttg
ccgatgcattcaatggccaatgagagcgcgattaacattttgaccggaccgcaaaccgac
catcgcacgaatacgccggcctacaaacaaacgcgggtgcgcatggaagtgatcgaacgc
tcgggagacacgccgttgccgcgcacgaatccgcgctttaaacagcgccatccgcaaaac
ggcgttgaagtcgagcggaaatggcagcgccgcgactacgtgccgctcacagacgaggaa
aaaggggtgaaagtcggtggctaa
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