Geobacillus sp. 12AMOR1: GARCT_00509
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Entry
GARCT_00509 CDS
T03966
Symbol
yfhQ
Name
(GenBank) putative A/G-specific adenine glycosylase YfhQ
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GARCT_00509 (yfhQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gea03400
]
GARCT_00509 (yfhQ)
Enzymes [BR:
gea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
GARCT_00509 (yfhQ)
DNA repair and recombination proteins [BR:
gea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GARCT_00509 (yfhQ)
Prokaryotic type
GARCT_00509 (yfhQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
EndIII_4Fe-2S
CHDNT
Motif
Other DBs
NCBI-ProteinID:
AKM17835
LinkDB
All DBs
Position
508236..509342
Genome browser
AA seq
368 aa
AA seq
DB search
MKITTWTKRFPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYF
EKFMEQFPTLEALAEAEEDEVLKAWEGLGYYSRVRHLHAAVKEVKERYGGQVPDDPEQFS
KLKGVGPYTVGAVLSLAYGVPEPAVDGNVMRVLSRLFFVTDDIAKPSTRKRFEQIVREIM
AYENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVPEELPVKTKKTAVKQVP
LAVAVLADDEGRILIRKRSNTGLLANLWEFPSCETDGADGKEKLEQMVGEQYGLQVELTE
PIVSFEHAFSHLVWQLTVFPGRLISSESTKEPFRLVSEDELEAYAFPVSHQRVWREYKEW
AGGVRRPD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcacaacgtggactaagcggtttccggcgcgcgagtttcagcgcgatttgctt
gactggttcgcccgggagcgccgcgacttgccgtggcgaaaagaccgagacccatacaaa
gtatgggtgtcggaagtgatgctgcagcagacgcgcgtcgagacggtgatcccgtatttt
gaaaagtttatggaacagtttccgacgctggaggcgctcgccgaggctgaagaagacgag
gtgctgaaggcgtgggaagggcttggctactactcgcgcgtccgccatttgcacgcggcg
gtcaaggaagtaaaggaacggtacggcgggcaggtgccggacgatccggagcagttttcg
aagctaaaaggagtcggtccgtacacagtcggggcggtgttgagccttgcctacggcgtg
ccggaaccggcggtggacggcaatgtcatgcgcgtgttgtcgcgcttgtttttcgtgacg
gatgatattgcgaaaccatcgacgcgaaaacggtttgaacaaatcgtccgcgagattatg
gcgtacgaaaacccgggagcgtttaacgaggcgctgattgagcttggcgctcttgtttgc
acgccgcgccgcccatcatgccttctttgtcccgtgcaagcctactgtcaagcgttcgcc
gaaggggtgccggaagagctgccggtgaaaacgaaaaaaacagcggtcaaacaagtgccg
cttgcggtggcggtgctggccgatgatgaaggacgcattctcatccgcaagcgcagcaac
accggtttgcttgcgaatttatgggagttccccagctgcgaaacggacggtgcagatgga
aaagagaagctcgagcaaatggttggggagcaatacggtttgcaagtagagcttacagaa
ccgatcgtttcgtttgagcatgcgttttcccatttagtctggcagttgaccgtgtttccc
ggccgcctgatcagcagcgagtccaccaaggagccttttcggcttgtgtctgaagatgag
ctcgaagcgtacgcctttccggtgtcccatcaacgtgtttggcgcgaatataaagaatgg
gcgggcggagtacgccgccccgattaa
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