Geobacillus sp. 12AMOR1: GARCT_00644
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Entry
GARCT_00644 CDS
T03966
Symbol
lcfB_1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea00061
Fatty acid biosynthesis
gea00071
Fatty acid degradation
gea01100
Metabolic pathways
gea01212
Fatty acid metabolism
gea02024
Quorum sensing
gea04146
Peroxisome
Module
gea_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GARCT_00644 (lcfB_1)
00071 Fatty acid degradation
GARCT_00644 (lcfB_1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GARCT_00644 (lcfB_1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
GARCT_00644 (lcfB_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gea01004
]
GARCT_00644 (lcfB_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gea04147
]
GARCT_00644 (lcfB_1)
Enzymes [BR:
gea01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GARCT_00644 (lcfB_1)
Lipid biosynthesis proteins [BR:
gea01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GARCT_00644 (lcfB_1)
Exosome [BR:
gea04147
]
Exosomal proteins
Exosomal proteins of breast milk
GARCT_00644 (lcfB_1)
Exosomal proteins of breast cancer cells
GARCT_00644 (lcfB_1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
NUMOD1
Motif
Other DBs
NCBI-ProteinID:
AKM17946
LinkDB
All DBs
Position
618402..619946
Genome browser
AA seq
514 aa
AA seq
DB search
MNLTTRLAQIAKQLPDKEAYVFMGERCTYQQLDAAVSRFADGLAQLGIRRGDHIALLLGN
SPQFVIGLYGALRLGATVIPINPIYTPEEIGYILLNGDVKAVIGLDLLAPLFVEAKKRLP
LLEHAIVCETPEGKEKGVSLSEGMKSFAEVLADGSPDFTGPELGDDDVAVILYTSGTTGK
PKGAMLTHKNIYSNAQDTADYLGINENDRVIAALPMFHVFCLTVALNAPLMNGGTVLIMP
KFSPAKLFQLAREEKATIFAGVPTMYNFLYQYEGGSADDLRTLRLCISGGASMPVALLEN
FEKKFNVIISEGYGLSEASPVTCFNPLDRPRKPGSIGTSIKNVENKVVNEYGEEVPVGEV
GELVVRGPNVMKGYYKMPEETAAALRDGWLHTGDLARMDEEGYFYIVDRKKEMIIVGGYN
VYPREVEEVLYSHPGVVEAAVIGVPDPDYGEAVRAFVVKKQPELAEEQLLAYCRERLAKY
KVPSEIRFLDELPKNATGKILRRALKEQLASSHA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaacgacgcggttggcgcaaatcgccaaacaactaccggacaaagaagcgtac
gtgtttatgggggaacgatgcacgtatcaacaattggacgccgcggtgtcgcggtttgcc
gacggattggcgcagcttggcattcgccggggggatcacatcgccttattgcttggcaat
tcgccgcaatttgtcatcggcctgtacggggcgctgcggctcggagcgaccgtcatcccg
atcaatccgatttatacgccggaagaaattgggtatattttgcttaatggcgacgtcaaa
gcggtaatcgggctcgatttgctcgctccgttgtttgtggaggcgaagaagcggcttccg
ctgctcgagcatgcgatcgtttgtgaaacgccggaagggaaggagaaaggtgtttcgctg
tcggaagggatgaaatcgtttgcagaagtgttggcggacggcagcccggactttaccgga
cctgaactgggtgatgacgatgtcgccgtcattttgtatacatccggaacaaccggcaag
ccgaaaggggcgatgctcactcataaaaacatatacagcaatgcgcaagatacggctgat
tatttaggcatcaatgaaaacgatcgcgtcatcgccgcgttgccgatgtttcatgtcttt
tgcttgaccgtggcgctcaatgccccgctgatgaacggcggaacggtgctcatcatgcca
aagttcagcccagcaaagttgtttcagctggcccgagaggaaaaggcgacgatttttgcc
ggcgtgccgacgatgtacaatttcctttatcagtacgaaggtggaagcgcggacgatttg
cggacgctccgcctttgcatctcaggaggcgcttcaatgccggtcgctttgcttgaaaat
tttgagaaaaagttcaacgtcatcatttcagaaggatatgggctttcggaagcgtctcct
gtcacttgctttaatcctctcgatcggccgcgcaagcccggttcgatcgggacaagcatt
aaaaatgttgagaacaaggtcgtcaatgaatacggtgaagaagtgcctgtcggcgaagtc
ggtgaacttgttgtgcgcggcccgaacgtcatgaaagggtactacaaaatgccggaagaa
acggcggctgccttgcgcgatggctggctgcacaccggcgatttggcgcgtatggatgag
gagggctatttctacatcgtcgaccggaaaaaagagatgatcatcgtcggcggctacaat
gtatatccgcgtgaggtcgaggaagtgctgtacagtcatccgggcgtcgtcgaagccgct
gtgatcggcgtgccggacccggattacggagaggcggtgcgggcgtttgtggtgaagaaa
caaccggagctggccgaagagcagctgctcgcctactgccgtgaacgactggcgaaatat
aaagtgccgagtgaaatccgcttcctcgatgagttgccgaaaaatgcaacaggaaaaatc
ttgcggcgggcgttaaaagagcagctcgcgtcttcccacgcttga
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