Geobacillus sp. 12AMOR1: GARCT_00659
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Entry
GARCT_00659 CDS
T03966
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gea
Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gea03400
]
GARCT_00659 (sbcD)
DNA repair and recombination proteins [BR:
gea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GARCT_00659 (sbcD)
Archaeal homologous recombinant proteins
GARCT_00659 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
AKM17961
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Position
636801..637985
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AA seq
394 aa
AA seq
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MRILHTADWHLGRTLEGRSRLAEQEAFIDELVEIVAKEQIDVVLMAGDVFDSVNPPAAAE
QLFYESLARLSDKGRRPVAVISGNHDHPDRISAARPLLSDYNIFLFGRPQAEVCRIDVPS
CGEAMMLAPLAYPSESRLAELLSSDHKETALRDRYDDRIRALFAAMAASFADETVNVVMS
HLYVAGGHTSDSERPIEVGGAYTVAAASLPGAAQYVALGHLHRPQDVRRAETAARYAGSP
LAYSFSEAGHTKSVTVVDVQPGGKANVTEIPLVSGKPLVRWKATDGLAQVYRWCEEGRDR
SCWIDLEVHVNEPLTMEEIQRLRKLHQGFIHIRPVFPEREREAAAETDRKPLSLVEMFRR
FYERQTGGQTPDEELVRLFLELAAEEKEGEGEEE
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattttgcatacggcagactggcatctcgggcggacgcttgaaggccgaagccgg
ttggcggagcaagaggcgtttatcgacgaacttgtcgagattgtagcaaaagaacaaatc
gatgtcgtcttgatggctggcgatgtgttcgattccgtcaatccgccggcggcggcggag
cagctgttttacgagagtttggcccgactgtccgataaaggccggcgtccggttgcggtc
atcagcggcaaccatgaccatccggaccgcatcagcgccgcccggccgctgctttccgac
tacaacattttcctttttggccgcccacaggcggaagtttgccgaattgacgttccgtcg
tgcggcgaggcgatgatgcttgcgccgttggcgtacccgtctgaatcgcggctcgctgag
ctattgtcatccgaccataaggaaaccgcgcttcgcgatcggtacgacgaccgcatccgg
gcgttgttcgctgcgatggccgcctcatttgccgatgaaactgtcaatgttgtgatgagc
catctatacgtggctggcggccatacgtccgattccgagcggccgattgaggtgggcggc
gcctatacggtggcggctgccagtttgcccggggcggcgcaatacgtggcgctcggtcat
ttgcaccgcccgcaggacgtcagacgggcggagacggcggcgcgctacgccggttcaccg
cttgcttacagcttttccgaagctgggcacaccaagtcggtgacggttgtcgacgtccag
ccgggcggaaaggccaacgtgacggagattccgcttgtttccggcaaaccgcttgtccgt
tggaaggcgacggacggacttgcccaagtgtatcgttggtgcgaggaaggaagagaccgg
tcgtgctggatcgatttagaggtccatgtaaacgagccgttgacaatggaagagattcaa
cggctgcgcaagcttcatcaagggtttatccatatccgcccggtgtttccggaacgggag
cgggaggcggcggctgaaacagaccgcaaaccgctttcccttgtggaaatgttccggcgt
ttttacgaacgtcaaaccggcggacaaacaccggatgaagagctcgtgcgcctttttttg
gaattggcggccgaggagaaggaaggggaaggagaagaggaatga
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