Geobacillus sp. 12AMOR1: GARCT_01134
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Entry
GARCT_01134 CDS
T03966
Symbol
spoVD
Name
(GenBank) Stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea00550
Peptidoglycan biosynthesis
gea01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GARCT_01134 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gea01011
]
GARCT_01134 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gea01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GARCT_01134 (spoVD)
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Paralog
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
AKM18428
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All DBs
Position
1110332..1112266
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AA seq
644 aa
AA seq
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MRVSYVTVRKRLTIVFLIGVLVFAIIDLRLGYVQFWLGDLLAERAKGLWGRNIPFEPKRG
EILDRNGVPLATNMSAPTVYVIPRQVKNPAEAAEKLAAVLGASVESVYKQMTKNTSIVRL
KEGRKISDEKAADVRALDLDGVYIAEDTKRYYPFGSYLSHVLGFTGIDNQGLTGLELYYD
KELSGERGSVQFYSDAKGRRMPDMADDYTPPTDGLNLVLTIDSRIQTIIERELDIAEAKY
NPDGIIAIAMNPNTGEILAMASRPTFDPADYRSVPPEIYNRNLPIWSTYEPGSTFKIITL
AATLEEHKVNLLKDHFFDPGYAKVAGATLRCWKKGGHGEQTFLEVVQNSCNPGFVALGER
LGKETLFRYIKQFGFGEKTGIDLQGEGTGILFDLKRVGPVELATTAFGQGVSVTPIQQVA
AVSAAINGGTLYTPYIAKEWIDPETREVVRRNTPKAKRRVISEETSKQVRYALESVVAQG
TGKKAYVEGYRVGGKTGTAQKAQGGRYLQNNHIVSFIGFAPADDPQLVVYVAVDNPKGTV
QFGGTVAAPIVGKVIEDSLRVMGVKPRKDQLEKERGWDEPRVIEVPNLIGLTKKDLQEQF
FDLKLDVSGEGDVIVEQSPEPGVKVKEGSTIRIYLAKREAAEER
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtatcgtacgtgaccgtgcgcaaacggttgacgatcgtctttttgatcggcgtt
ttggtttttgccattatcgatctccgtctcggctatgtccaattttggctcggcgatcta
ttagcggaacgggcgaaagggctgtggggtcggaacatcccatttgagccgaagcgcggc
gaaattttggaccgcaacggcgtcccgctggcgacgaatatgagcgcgccgacggtgtat
gtcatcccgcggcaagtgaaaaatccggcggaagcggcagaaaagctggcggcggttttg
ggcgcttcggtcgaatccgtttataaacaaatgacaaaaaacacctcgatcgtccgcttg
aaagaagggcggaaaatttccgacgagaaagcggcggacgtgcgcgcgctcgatttggac
ggggtgtacattgctgaagacacgaaacgctactatccgtttggcagctacttatcgcat
gtgcttggctttactggcattgacaaccaagggctcacagggcttgaactgtattatgac
aaagaactgagcggagagcgcggttcggtgcagttttactccgatgcaaaagggcggcgc
atgcccgatatggcggatgactatacgccgccgaccgacggcttgaacttggtgctcacg
attgactcacgcattcagacgatcatagagcgggagctcgatattgctgaggcgaaatac
aatccagacggcatcatcgccattgccatgaacccgaatacgggggaaattttggcgatg
gcgagccggccgacgtttgacccggccgattaccgcagcgtccctccggaaatttacaac
cgcaatttgccgatttggagcacgtatgaaccggggtcgacgtttaaaatcattacgttg
gctgcaacgcttgaggagcataaagtcaacctccttaaagaccacttctttgatccgggc
tacgctaaagtggccggcgctacgctccgctgctggaaaaagggcggccatggggagcaa
acgtttttggaagtcgtacaaaactcgtgcaacccgggatttgtcgctttgggggagcgg
ctcggaaaggaaacgctgtttcgttatattaagcagtttggcttcggtgagaaaaccggc
attgacctgcaaggggaagggactggcattttgtttgacttaaagcgggtcgggccggtc
gaattggcgacgaccgcgttcggccaaggggtgtcggtgacgccgatccagcaagtcgcc
gccgtatcggccgcgatcaacggcggcactctatacaccccgtacatcgccaaagaatgg
atcgacccggaaacaagggaagtcgtacgccgcaatacaccaaaggcgaaacggcgcgtc
atttccgaggaaacgtcgaaacaagtccgctatgcgcttgagagcgttgtcgcccaaggc
acagggaaaaaggcgtatgtcgaaggctaccgcgtcggcgggaaaaccggaacggcgcaa
aaagcgcaaggcggccgctatttgcaaaacaaccatatcgtgtcgttcatcggttttgcg
ccggcggacgacccgcagctcgtcgtgtacgtcgctgttgacaatccgaaaggcacggtc
caattcggcggcacggttgcggcgccgatcgttggcaaggtcatagaagacagcctgcgg
gtgatgggcgtgaagccgcgcaaagaccaacttgagaaggaacggggctgggatgagccg
agagtcattgaggtgccgaatttgatcggactgacaaaaaaagatttgcaagaacagttt
tttgacttaaaattagatgttagtggcgagggcgatgtcattgtcgaacaatcgccggag
cccggggtgaaagtaaaagaaggctcgacgattcgcatttatttggcgaaacgcgaagcg
gcagaggagcggtaa
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