Geobacillus sp. 12AMOR1: GARCT_01200
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Entry
GARCT_01200 CDS
T03966
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gea
Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gea03019
]
GARCT_01200 (rnc)
03009 Ribosome biogenesis [BR:
gea03009
]
GARCT_01200 (rnc)
03036 Chromosome and associated proteins [BR:
gea03036
]
GARCT_01200 (rnc)
Enzymes [BR:
gea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GARCT_01200 (rnc)
Messenger RNA biogenesis [BR:
gea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GARCT_01200 (rnc)
Ribosome biogenesis [BR:
gea03009
]
Eukaryotic type
90S particles
RNase
GARCT_01200 (rnc)
Prokaryotic type
rRNA processing factors
GARCT_01200 (rnc)
Chromosome and associated proteins [BR:
gea03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GARCT_01200 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Phage_P2_GpU
NTP_transf_4
Motif
Other DBs
NCBI-ProteinID:
AKM18494
LinkDB
All DBs
Position
1178576..1179316
Genome browser
AA seq
246 aa
AA seq
DB search
MSKQKDKERIHEKRRAKFQELQRKIGITFQNEKLLMQAFTHSSYVNEHRRRLHEDNERLE
FLGDAVLELTVSQYLFQKFPHMSEGQLTKLRAAIVCEPSLVKFANALSFGELVLLGKGEE
LTGGRTRPALLADVFEAFIGALYLDQGMEAVLHFLGQTIFPKIDEGAFSHVMDFKSQLQE
LVQRDGSGTLEYAILEEKGPAHNKEFVARVALNGQELGIGVGRSKKEAEQHAAQMALETL
RAAERP
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaaaagacaaagaacgcatccacgaaaaaaggcgggcgaagtttcaagaa
ctgcaaaggaaaatcgggatcaccttccaaaatgaaaagctgttgatgcaagcgttcacc
cattcatcgtatgtgaatgagcatcggcggcggcttcacgaggataatgaacggctcgag
tttttgggcgacgccgtgctggagctgaccgtttcccaatatttgtttcaaaaattcccg
catatgagcgaagggcagttgacaaagctgcgggcggccattgtctgtgagccgtcgctt
gtgaaatttgccaacgccctgtcgtttggcgaactcgttttgcttggcaaaggcgaggag
ctgaccggcggacggacgcgcccggcgcttttggccgacgtgtttgaagcgtttatcggc
gctctttatttggatcaaggaatggaagcggttctccattttttagggcaaacgatcttt
cccaaaattgatgaaggtgctttttctcatgtgatggattttaaaagccagctgcaggaa
cttgtgcagcgcgacggcagcggaacgcttgaatacgccattttggaagaaaaaggcccg
gcccacaacaaagagtttgtcgcccgcgtggcgctaaacggccaagaactcggcatcggc
gtcggccgctccaaaaaggaagccgagcagcatgcggcgcaaatggcgctcgagacgttg
cgggctgccgagcggccatag
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