Geobacillus sp. 12AMOR1: GARCT_01274
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Entry
GARCT_01274 CDS
T03966
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gea
Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gea03016
]
GARCT_01274 (truB)
Enzymes [BR:
gea01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GARCT_01274 (truB)
Transfer RNA biogenesis [BR:
gea03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GARCT_01274 (truB)
Prokaryotic type
GARCT_01274 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Ribosomal_S28e
Motif
Other DBs
NCBI-ProteinID:
AKM18568
LinkDB
All DBs
Position
1247834..1248805
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AA seq
323 aa
AA seq
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MDRRTVYPFPLREYRQGKGAPMDGVLLLNKPKGITSHDCVAKVRRLLGVKKVGHTGTLDP
NVSGVLPLCLGKATRIAEFLTGATKTYEGEVTLGAATTTEDADGDVVAVRPVERPIARVE
IEAVFRRLIGEIEQTPPMYSAVKVGGKKLYEYARAGIEVERPTRRVTIYELELLDDREQF
AGETVSFRFRVTCSKGTYVRTLAVTVGEQLGYPAHMSDLIRTASGPFRLEDCVTLEEVER
RAADGTAAALLIPIEQALFHLPKYEINDKVAEKVKNGALLRLPAFLHALDGPVVLVTPER
EALALYVKHPARPGLMKPLKVFR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggatagacgaaccgtctatccatttccgttgcgcgagtatagacagggaaagggtgcg
ccgatggacggggtattgctgctcaacaaaccaaaaggaataacgtcgcacgactgtgtg
gcaaaggtgcgccgcctgcttggggtaaaaaaagtcggccataccggcacgctcgatcca
aatgtgtccggcgtcctgccgctttgccttggcaaagcgacgcgcattgcggaatttctt
accggagcgacgaaaacgtacgaaggggaagtgacgctcggtgcagcgacgacgaccgaa
gacgccgacggtgacgtcgttgccgtccggccggtcgagcggccgattgcgcgggtggaa
atcgaagccgttttccgccgccttatcggggaaatcgagcaaacgccgcccatgtattcg
gcggtgaaagtcggcggcaaaaagctgtatgaatatgcgcgcgccggcatcgaggtggag
cgcccgacgcggcgcgtgacgatttacgagctcgagctgctcgatgatcgcgagcagttt
gccggggagacggtgtcatttcgcttccgcgtcacatgcagcaaaggcacgtatgtccgc
acgctcgcagtgacggtcggcgagcagctcggctatccggctcatatgtccgatctcatc
cgcacagcgtccggcccgtttcggcttgaagattgtgtgacgcttgaagaagtcgagcgc
cgggcggccgacggaacggccgccgccttgctcattccgatcgagcaagcgctttttcat
ttgccgaaatatgaaatcaatgataaagtagcagagaaagtaaaaaacggggcgctgctc
cggcttcccgcctttttgcatgcgcttgacgggccggtcgtgctcgtgacgcccgagcgg
gaggcgctggccctgtatgtaaagcatccggcgcgcccgggcttgatgaaaccgctcaaa
gtgtttcgttga
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