Geobacillus sp. 12AMOR1: GARCT_01545
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Entry
GARCT_01545 CDS
T03966
Symbol
kdgR_1
Name
(GenBank) Transcriptional regulator KdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
gea
Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gea03000
]
GARCT_01545 (kdgR_1)
Transcription factors [BR:
gea03000
]
Prokaryotic type
Helix-turn-helix
IclR family
GARCT_01545 (kdgR_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
TrmB
MarR
HTH_23
Dimerisation
MarR_2
Fe_dep_repress
HTH_36
DnaD_N
HTH_11
B-block_TFIIIC
HTH_29
Rrf2
HTH_7
GAF
RPA_C
HTH_28
PadR
MCM_C
HTH_24
FUR
HTH_27
F-93_WHD
HTH_20
HTH_45
LexA_DNA_bind
DUF4423
TnsD
HTH_5
HTH_Crp_2
HTH_40
Sigma70_r4_2
DUF7646
Motif
Other DBs
NCBI-ProteinID:
AKM18833
LinkDB
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Position
1540625..1541410
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AA seq
261 aa
AA seq
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MEKENIVKSVSRALQIIDIVSAKKDGLGVTEIAKQMDINKSSVYRILTTLAQYGYIEQHP
ETERYKLGYKFLEISSKLLDSIDLRQEAKPYLRELEKETNEVIHLVVYDQGEVIYIEKLE
GTETLRMHSKVGKRAPMHCTAVGKAILASLPPAVAAEIIDRKGLPRHTDWTITDREAFFR
ELDTIRQNGYALDLEENEYGIRCVAVPIFDYTGNVVAAVSVSGPTIRMTDDRITSLTVRM
RQIGKELSARLGHRPIHSVQP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaaaatatagtgaaatctgtaagtcgggcgttgcaaattattgacatcgtc
agtgcgaaaaaagacgggctaggcgtgacggaaatcgcgaaacaaatggacattaacaaa
agttccgtctaccgcattttaacgacgctcgcccaatacggctacatcgagcagcatccg
gaaacagagcggtacaagcttggctacaagtttttggaaatcagctcgaaactgcttgac
tcgattgatttgcgccaagaggcgaagccatatttgcgcgagctcgaaaaagaaacgaac
gaggtcatccacctcgtcgtctatgatcaaggggaagtcatttatattgaaaaattggaa
ggaacggagacgctgcgcatgcactccaaagtcggcaagcgggctccgatgcattgcacg
gccgttggcaaggcgattttagccagcttgccgccggctgtcgccgccgagatcatcgac
cggaaagggttgcccagacataccgattggacgatcaccgaccgcgaggcgtttttccgc
gagcttgacaccattcggcaaaacggatatgcgcttgacctggaagaaaatgaatatggc
atccgctgcgtcgcggtgccgattttcgactatacaggaaacgttgtcgccgccgtcagc
gtttccggcccgacgatccgcatgacggacgaccgcatcacatcgctcactgtgcgcatg
cggcagatcggcaaagaactgtcggcaaggctcggccatcggccgattcattccgtccag
ccgtaa
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