Geobacillus sp. 12AMOR1: GARCT_01913
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Entry
GARCT_01913 CDS
T03966
Symbol
kdgR_2
Name
(GenBank) HTH-type transcriptional regulator KdgR
KO
K02525
LacI family transcriptional regulator, kdg operon repressor
Organism
gea
Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gea03000
]
GARCT_01913 (kdgR_2)
Transcription factors [BR:
gea03000
]
Prokaryotic type
Helix-turn-helix
LacI family
GARCT_01913 (kdgR_2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_26
HTH_10
HTH_40
TetR_N
HTH_31
HTH_7
HTH_19
MarR_2
Fe_dep_repress
TetR_C_17
HTH_24
SpoIIID
HTH_IclR
FtsL_2
HTH_Tnp_ISL3
BilD_C
HTH_5
HTH_ABP1_N
Motif
Other DBs
NCBI-ProteinID:
AKM19186
LinkDB
All DBs
Position
complement(1903463..1904479)
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AA seq
338 aa
AA seq
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MKKVTMADVAKLANVSKSTVSQYLNKRYEYMSEETRKRIAEAIEELGYQPNIIARSLKQK
TTATIGVIVFNMLHMMTTQVLHAIEEECQKRGFQVIVCNSGDDPDKEKTYVDTLLAKQVD
GLIVFPTGKNEDVYRRLVEERFPLVFVDRMVPGVEADSVLLDNAGAAEMAVQYFASQGRD
RIAIVTPPLVSYNVPRMERLEGFRAAMEKRGFEVGDQNVIAAEPAALPGELKKRFMESER
PNALFAINDLTLMGVLRFVKDAGVRVPDEVAIINIDDVPFADIYTPALTTIAQPTFAMGK
KAAERVFEQMKAKKADGPRVFRFSPVLMERTSIKREKA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaagtaacgatggccgatgtcgcgaaattggccaacgtttcgaaaagtacggtg
tcacaatacttaaataagcgctatgagtatatgagcgaggagacgagaaaacgcatcgcc
gaggcgattgaagagcttgggtatcagccgaacatcatcgcccgcagtttgaagcaaaag
acgacagcgaccattggcgtgattgtttttaatatgcttcatatgatgacaacgcaagtg
ctgcacgccattgaagaggaatgccaaaagcgcgggtttcaagtcattgtctgcaattcc
ggcgatgatccggataaggaaaaaacatatgttgatacgctgctggcgaagcaagtggac
gggttgatcgtgtttccaacagggaagaacgaggatgtctatcgccgtcttgtcgaggaa
cggtttccacttgtgtttgtcgaccggatggtgccgggagtggaggcagacagcgtgctg
cttgataatgcaggtgcagcggaaatggcggttcagtatttcgcttcccagggccgcgat
cggattgcgattgtcaccccgccgcttgtctcttacaacgtgccgcggatggagcggttg
gaagggtttcgggcggctatggagaaaaggggatttgaagttggcgatcaaaacgtcatc
gccgctgaacctgccgcgctgcctggggagctgaagaagcggttcatggaatcggagcgg
cccaatgccttgtttgcgattaacgacttgacgttaatgggcgttttgcggtttgtgaaa
gacgcaggggttcgtgtgccggatgaggtggcgatcatcaacatcgatgatgtaccgttt
gccgatatttacacgccggcgctgacaaccatcgcccagccgacgtttgcgatggggaag
aaagcagctgagcgcgtgtttgaacaaatgaaagcgaaaaaagccgacggtccgcgcgta
tttcgtttctccccggtattgatggaacggacatcgatcaaacgggagaaggcatga
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