| Entry |
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| Symbol |
cshB
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| Name |
(GenBank) DEAD-box ATP-dependent RNA helicase CshB
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| KO |
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| Organism |
gea Geobacillus sp. 12AMOR1
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| Brite |
KEGG Orthology (KO) [BR:gea00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:gea03019]
GARCT_02457 (cshB)
03009 Ribosome biogenesis [BR:gea03009]
GARCT_02457 (cshB)
Enzymes [BR:gea01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GARCT_02457 (cshB)
Messenger RNA biogenesis [BR:gea03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GARCT_02457 (cshB)
Ribosome biogenesis [BR:gea03009]
Prokaryotic type
rRNA helicases
GARCT_02457 (cshB)
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| SSDB |
|
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(2412778..2414088)
|
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| AA seq |
436 aa
MTETQFARFSFQPFVIEAIKALRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLL
PIIEKIDPERAEVQAVITAPTRELATQIYHETLRITKFCPKDRMIIARCFIGGTDKQKAL
EKLTVQPHIVIGTPGRINDFIREQALDVHTARTLVVDEADLMLDMGFLVDVDQIAARMPK
ELQMLVFSATIPEKLKPFLKKYMENPTFVQVKPRQAANENIEHVLIPLRGREKARLLHDV
LVSYNPYLAIVFVNTRKMADEVADLLAEQGLKVGVLHGDLTPRERKKVMNQIRDLEFQYV
VATDLAARGIDIEGVSHVVNYELPDDLQFYIHRAGRTARAGYNGIAATIYEPSDQDAIAR
LEKMGISFVHRDLVRGEWKELPPWNRRSKRAGEKKDELAPVIAKLKKAKKVKPGYKKKLR
AELEKKKKRLGRFKQL |
|---|
| NT seq |
1311 nt +upstreamnt +downstreamnt
atgacggagacgcagtttgcccgtttttcgtttcaaccgtttgtcatcgaagccattaag
gcgcttcgtttttataaaccgacggaaattcaagaacgcatcattccgggggcgttgcgc
ggcgaaagcatggtcggccagtcgcaaaccgggacagggaaaacgcatgcctatttgttg
ccgatcatcgaaaagatcgatccggagcgtgcggaagtgcaggctgtcatcacggcgccg
acgcgcgagctggcgacgcaaatttatcatgagacattgaggattacaaaattttgcccg
aaagaccgcatgatcatcgcccgctgtttcatcggcgggacggataagcaaaaagcgctc
gagaaattgacggtgcagccgcacatcgtcatcggcacgccggggcgcatcaacgatttc
atccgcgagcaggcgcttgatgtgcatacggcgcgcactcttgttgttgatgaggccgat
ttgatgctggatatgggctttctcgtcgatgtggaccaaatcgccgcccgcatgccgaaa
gagttgcaaatgcttgtgttttcggcgaccattccggaaaagctgaagccgtttttgaaa
aaatatatggaaaatccaacattcgtccaggtcaagccgagacaggcggcaaacgaaaac
atcgagcatgtgctcattccgctgcgtgggcgcgagaaggctaggctgcttcatgatgtg
cttgtcagctacaacccgtatttggccatcgtgttcgtcaacacgagaaagatggcggat
gaagtcgccgaccttcttgcggaacaagggctgaaagtcggcgtgctgcacggcgatttg
acgccgcgcgaacgaaaaaaagtgatgaaccaaatccgcgatctcgagtttcaatacgtg
gtcgccaccgatttggcggcgcgcggcatcgacatcgaaggagtcagccatgttgtcaac
tacgaactgccggatgatttgcagttttacatccaccgcgctggaaggacggcgcgcgcc
ggctacaacggcattgcggcgacgatttacgagccgtccgaccaggatgcgatcgcccgc
ctggagaaaatgggcatttcgttcgtccaccgcgatcttgtgcgcggcgaatggaaagag
ctcccgccatggaaccggcggagcaagcgggccggcgaaaagaaagacgaactcgcgccg
gtgatcgccaagctgaaaaaggcgaagaaagtgaagccgggctataagaaaaagctgcgc
gccgagctcgaaaagaagaaaaagcggcttggccgtttcaaacaattgtag |
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