KEGG   Geobacillus sp. 12AMOR1: GARCT_02510
Entry
GARCT_02510       CDS       T03966                                 
Symbol
ygcB
Name
(GenBank) CRISPR-associated endonuclease/helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
gea  Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:gea00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gea02048]
    GARCT_02510 (ygcB)
Enzymes [BR:gea01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GARCT_02510 (ygcB)
Prokaryotic defense system [BR:gea02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    GARCT_02510 (ygcB)
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII Cas3_HD Helicase_C HD AAA_22 HDOD ATPase
Other DBs
NCBI-ProteinID: AKM19761
LinkDB
Position
complement(2463205..2465397)
AA seq 730 aa
MNDVYAHTPRANGQEWHRLDEHLVSVAEMAQSFAAPFQGGRVAYLCGLLHDLGKFHPLFQ
QYLKKQADGEMGQSVPHAIWGAALMYQVYWKKTGNRHAWQWFSLPIAGHHVGLHSSHYLS
STLGQSLKEQHLHFREVLKQAESFLKKFVFPCMQSVENISSLSETDREMWIRLIFSALVD
ADYLDTERHFQPELSPLRTPVASITDLWNQFTADQEQLTSRTDDTAVNRMRREVYEECVR
SASRPQGVYRLTVPTGGGKTRSSLAFALKHAVEHGLDRVIVAIPYTSIIEQTADVYRGIF
GNDAVLEHHSQIEVDDEKEEADERLIQQRLAAENWDAPLIVTTTVQLFDSLFSNRPSKVR
KLHNLSRSVVILDEVQTLPTELLKPTLDALAMLVRHCQTTVVLSSATQPFFEESRFLDVF
SEIEVKEMLPLPTVNRHFQQMQRVDYEIWKSPVSLPQLVRFIREQKQLLVVFNTRKEAKE
CVELLQEDDGVFHLSTLLCSAHRRRILEEVRERLKKNQPVRLISTQVVEAGVDLDFPIVM
RQMGPLDRIVQAAGRCNREGKMDKGNVIIFETEDMPSPRGSYRTATETARFLLAQRHPDD
LHDPNIFREYFRRLFASVDVDSKNIQKDREMLDYPLVAEKYRLIDQDTVSVIVPYEEASE
YLRMWESSPSRYSFRRLQPYMVQLYRFEAEKKEKDGWLREVADNVYEWLGDYDERIGIKE
EVYDPLSLIG
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgaatgatgtgtatgctcatacgccacgggcaaatggacaggaatggcatcggttggac
gaacatttggtaagcgtagcggaaatggctcaatcattcgccgctccttttcaaggggga
agagtggcttatttatgcggccttttgcatgacttaggaaaattccatcctctttttcaa
caatatttgaaaaagcaagcagatggagaaatgggccaaagcgtccctcatgcgatttgg
ggagcggcgttgatgtaccaagtgtattggaaaaaaacaggaaatcgacatgcctggcaa
tggttttcgttgccgatcgccggccatcatgtgggtttgcattcgtctcactatttatca
tctacccttggacagagcttaaaagaacaacatttgcactttcgggaagtcttgaagcaa
gccgaatcgttcctaaagaaattcgtatttccatgcatgcaaagtgtggaaaatatttct
tcgctttctgaaaccgatagggagatgtggattcgcctgatcttttctgcgcttgttgac
gctgattatttagatacagagcgccacttccagccggagctttctccgctccgaacgcct
gtggcttcgataacggatttatggaatcaatttaccgccgatcaggaacaattaacaagc
cgcacggatgatacagcggtgaatcggatgagaagggaagtgtatgaggaatgcgtccgc
tccgcctccagaccgcagggagtatatcggttgaccgtgccgaccggaggggggaagacg
agaagcagtttagcttttgcattgaaacatgcggtggaacatggacttgaccgcgttatt
gtcgccattccgtatacaagcattattgagcagacggcggatgtataccgcggcattttc
gggaacgatgcggtgttggagcaccacagccaaattgaggtggatgatgagaaggaagaa
gcggatgaaaggctcatccaacaacgcctcgctgcggaaaattgggatgctcccctcatt
gtcacgacaaccgtgcagctgtttgacagcctgttcagcaatcgtccaagcaaggtgcgc
aaactgcataacttgtcgcgcagcgtcgtaattctcgatgaggttcaaacgctcccgaca
gaactgctaaagccgacattagatgcattggccatgttggtgcgtcattgtcagacaacc
gttgtcttatcgagcgccactcagccgttttttgaggaaagccgatttttggatgtattt
tccgaaatagaggtcaaagaaatgttgccgttgccgaccgtgaatcgtcattttcaacaa
atgcagcgggtggactatgaaatatggaaatcacccgtttcattgccacaacttgtccgt
ttcattcgagaacaaaagcaattattggttgtctttaacacgagaaaagaggcgaaagag
tgcgtcgagctccttcaagaagatgatggggtattccatctttccacccttctttgcagc
gcgcatcgtcgccgaattttagaggaagttcgtgaacgtctaaagaaaaatcaacctgtc
cgcctcatcagtacacaagtggtggaagcaggggttgatttagattttccgattgtcatg
cggcaaatggggcccctcgaccggattgtccaagcggcaggacgctgcaatcgcgaagga
aaaatggataaaggaaacgtgattatttttgaaacagaagacatgccaagcccaagagga
tcgtatcgaacagcgacggaaacagcacggttcttattggcacaacgccatcctgatgat
ttgcacgatcccaatatatttcgggaatatttccgtcgtttattcgcctcggtggatgtg
gattcgaaaaacatccaaaaagatcgggaaatgcttgattatccattagttgccgaaaag
tatcgccttattgatcaggatacggtttccgtcatcgttccatatgaggaggcgtcggaa
tacttgcgaatgtgggaatcttctccgtcccgctattcgtttcgccgtttgcagccatat
atggttcagttgtatcgttttgaggcggaaaagaaagaaaaggacggatggctgcgggaa
gtggcggacaatgtctatgaatggcttggtgactatgatgaacggatcggaattaaagaa
gaagtttacgatccactcagtttgattggatag

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