Geobacillus sp. 12AMOR1: GARCT_02784
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Entry
GARCT_02784 CDS
T03966
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GARCT_02784 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gea03400
]
GARCT_02784 (mutM)
Enzymes [BR:
gea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GARCT_02784 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GARCT_02784 (mutM)
DNA repair and recombination proteins [BR:
gea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GARCT_02784 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DUF1631
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AKM20034
LinkDB
All DBs
Position
complement(2709844..2710668)
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AA seq
274 aa
AA seq
DB search
MPELPEVETIRRTLLPLVAGKTIEEVRVFWPNIIRHPQDPAAFAARLAGQTVRGIDRRGK
FLKFLLDRDMLISHLRMEGRYAVAQSDEPLEPHTHIVFRFTDGSELRYRDVRKFGTMHVY
AKEEADCRPPLAQLGPEPLSPAFSPAVLAAKAAKTKRTVKALLLDQTVVSGFGNIYVDEA
LFRAGILPGRPAASLTDEELARLHEEMVATIGEAVMKGGSTVRTYVNTQGEAGMFQHRLF
VYGRKGEPCKRCGAPIEKMVVAGRGTHYCPRCQR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccggaagtggaaacgatccgccgcacgctgttgccgcttgtcgctggc
aaaacgattgaagaggtgcgggtgttttggccgaatatcattcgtcatccgcaagacccg
gcggcgtttgctgccaggctggccgggcagacggtgcgcggcatcgatcggcgcgggaaa
tttttgaaatttttgcttgaccgggatatgctcatctcccatttgcgcatggaggggcgc
tacgcggtcgcccagtccgatgagccgcttgaaccgcatacgcacattgtgtttcgtttt
acagacggcagtgagcttcgttatcgcgatgtacgcaaattcggaaccatgcacgtgtac
gcgaaagaggaagcagactgccggccgccgctcgctcaattagggccggaaccgctgtcc
ccagcgttttctccggcggtgttggccgcaaaagcggcgaaaacaaagcggacggtgaaa
gcgttgttgcttgatcaaacggtcgtgtccgggtttggcaacatttatgtcgacgaagcg
ctgtttcgcgccggcattctccctggacggccggctgcttcgctgacggatgaagaactt
gcacggttgcacgaagaaatggtggcgacgatcggcgaggcggtcatgaaagggggaagc
acggtgcgcacgtatgtgaatacgcaaggagaagccggaatgttccagcatcgcctgttc
gtatacggccgcaaaggggagccgtgcaaacggtgcggcgccccgattgagaaaatggtt
gtcgccggccgcggcacgcattattgcccgcgttgccaacgctag
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