Geobacillus sp. 12AMOR1: GARCT_02785
Help
Entry
GARCT_02785 CDS
T03966
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea03030
DNA replication
gea03410
Base excision repair
gea03420
Nucleotide excision repair
gea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GARCT_02785 (polA)
03410 Base excision repair
GARCT_02785 (polA)
03420 Nucleotide excision repair
GARCT_02785 (polA)
03440 Homologous recombination
GARCT_02785 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gea03032
]
GARCT_02785 (polA)
03400 DNA repair and recombination proteins [BR:
gea03400
]
GARCT_02785 (polA)
Enzymes [BR:
gea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GARCT_02785 (polA)
DNA replication proteins [BR:
gea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GARCT_02785 (polA)
DNA repair and recombination proteins [BR:
gea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GARCT_02785 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GARCT_02785 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
XPG_I
Enkurin
DUF3913
Motif
Other DBs
NCBI-ProteinID:
AKM20035
LinkDB
All DBs
Position
complement(2710766..2713399)
Genome browser
AA seq
877 aa
AA seq
DB search
MLKNKLVLIDGNSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEQPTHILVAFD
AGKTTFRHETFQDYKGGRQQTPPELSEQFPLLRELLKAYRIPAYELDHYEADDIIGTLAA
RAEREGFAVKVISGDRDLTQLASPQVTVEITKKGITDIESYTPETVTEKYGLTPEQIVDL
KGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTVENVLASIDEIKGEKLKENLRQYRDLALL
SKQLAAICRDAPVELTLDDIVYKGEDREKVVALFQELGFQSFLDKMAVQTDEGEKPLAGM
DFAIADSVTDEMLADKAALVVEVVGDNYHHAPIVGIALANERGRFFLRPETALADPKFLA
WLGDETKKKTMFDSKRAAVALKWKGIELRGVVFDLLLAAYLLDPAQAAGDVAAVAKMHQY
EAVRSDEAVYGKGAKRTVPDEPTLAEHLARKAAAIWALEEPLMDELRRNEQDRLLVELEQ
PLAGILANMEFTGVKVDTKRLEQMGAELTEQLQAVERRIYELAGQEFNINSPKQLGMVLF
DKLQLPVLKKTKTGYSTSADVLEKLAPHHEIVEHILHYRQLGKLQSTYIEGLLKVVHPVT
GKVHTMFNQALTQTGRLSSVEPNLQNIPIRLEEGRKIRQAFVPSEPDWLIFAADYSQIEL
RVLAHIAEDDNLIEAFRRGLDIHTKTAMDIFHVSEEDVTANMRRQAKAVNFGIVYGISDY
GLAQNLNITRKEAAEFIERYFASFPGVKQYMDNIVQEAKQKGYVTTLLHRRRYLPDITSR
NFNVRSFAERTAMNTPIQGSAADIIKKAMIDLSVRLREERLQARLLLQVHDELILEAPKE
EIERLCRLVPEVMEQAVALRVPLKVDYHYGPTWYDAK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaaacaagctcgtcttaattgacggcaacagcgtggcgtaccgcgcctttttc
gcgttgccgcttttgcataacgataaagggattcatacgaacgcagtctacgggtttacg
atgatgttaaacaaaattttggcggaagagcagccgacccacattctcgtggcgtttgac
gccgggaaaacgacgttccgccatgaaacgttccaagactataaaggcgggcggcagcag
acgccgccggaactgtcggaacagtttccgctgctgcgcgaattgctcaaggcgtaccgc
atccccgcctatgagctcgaccattacgaagcggacgatattatcggaacgcttgccgcc
cgcgctgagcgggaagggtttgcagtgaaagtcatttccggcgaccgcgatttaacccag
cttgcttccccgcaagtgacggtggagattacgaaaaaagggattaccgacatcgagtcg
tacacgccggagacggtcacggaaaaatacggcctcaccccggagcaaattgtcgacttg
aaaggattgatgggcgacaaatccgacaacatccctggcgtgcccggcatcggggaaaaa
acagccgtcaagctgctcaagcaattcggcacggtcgaaaacgtactggcatcgatcgat
gagatcaaaggggagaagctgaaagaaaatttgcgccaataccgggatttggcgctttta
agcaaacagctggccgctatttgccgcgacgccccggttgagctgacgctcgatgacatt
gtctacaaaggagaagaccgggaaaaagtggtcgccttgtttcaggagctcggattccag
tcgtttctcgacaagatggccgtccaaacggatgaaggcgagaagccgctcgccgggatg
gattttgcgatcgccgacagcgtcacggacgaaatgctcgccgacaaagcggccctcgtc
gtggaggtggtgggcgacaactatcaccatgccccgattgtcgggatcgccttggccaac
gaacgcgggcggtttttcctgcgcccggagacggcgctcgccgatccgaaatttctcgct
tggcttggtgatgagacgaagaaaaaaacgatgtttgattcaaagcgggcggccgtcgcg
ttaaaatggaaaggaatcgaactgcgcggcgtcgtgttcgatctgttgctggccgcttac
ttgctcgatccggcgcaggcggcgggcgacgttgccgcggtggcgaaaatgcatcagtac
gaggcggtgcggtcggatgaggcggtctatggaaaaggagcgaagcggacggttcctgat
gaaccgacgcttgccgagcatctcgcccgcaaggcggcggccatttgggcgcttgaagag
ccgctgatggacgaactgcgccgcaacgaacaagatcggctgctcgtcgagctcgaacag
ccgctggctggcattttggccaatatggaatttactggagtgaaagtggacacgaagcgg
cttgaacagatgggggcggagctcaccgagcagctgcaggcggtcgagcggcgcatttac
gaactcgccggccaagagttcaacattaactcgccgaaacagctcgggatggttttattt
gacaagctgcagctcccggtgttgaaaaagacaaaaaccggctattcgacttcagccgat
gtgcttgagaagcttgcaccgcaccatgaaatcgtcgaacatattttgcattaccgccaa
ctcggcaagctgcagtcaacgtatattgaagggctgctgaaagtggtgcaccccgtgacg
ggcaaagtgcacacgatgttcaatcaggcgttgacgcaaaccgggcgcctcagctccgtc
gaaccgaatttgcaaaacattccgattcggcttgaggaagggcggaaaatccgccaggcg
ttcgtgccgtcggagccggactggctcatctttgcggccgactattcgcaaatcgagctg
cgcgtcctcgcccatatcgcggaagatgacaatttgattgaagcgttccggcgcgggttg
gacatccatacgaaaacagccatggacattttccatgtgagcgaagaagacgtgacagcc
aacatgcgccgccaagcgaaggccgtcaattttggcatcgtgtacggcattagtgattac
ggtctggcgcaaaacttgaacattacgcgcaaagaagcggctgaatttattgagcgatat
tttgccagttttccaggtgtaaagcaatatatggacaacattgtgcaagaagcgaaacaa
aaagggtatgtgacgacgctgctgcatcggcgccgctatttgcccgatattacaagccgc
aacttcaacgtccgcagcttcgccgagcggacggcgatgaacacaccgattcaagggagc
gccgctgatattattaaaaaagcgatgatcgatctaagcgtgaggctgcgcgaagaacgg
ctgcaggcgcgcctgttgctgcaagtgcatgacgaactcattttggaggcgccgaaagag
gaaatcgagcggctgtgccgcctcgttccagaggtgatggagcaagccgtcgcactccgc
gtgccgctgaaagtcgattaccattacggtccgacgtggtacgacgccaaataa
DBGET
integrated database retrieval system
