Geobacillus sp. 12AMOR1: GARCT_02799
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Entry
GARCT_02799 CDS
T03966
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea03030
DNA replication
gea03430
Mismatch repair
gea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GARCT_02799 (dnaE)
03430 Mismatch repair
GARCT_02799 (dnaE)
03440 Homologous recombination
GARCT_02799 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gea03032
]
GARCT_02799 (dnaE)
03400 DNA repair and recombination proteins [BR:
gea03400
]
GARCT_02799 (dnaE)
Enzymes [BR:
gea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GARCT_02799 (dnaE)
DNA replication proteins [BR:
gea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GARCT_02799 (dnaE)
DNA repair and recombination proteins [BR:
gea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GARCT_02799 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
TPR_14
HROB
TPR_6
Motif
Other DBs
NCBI-ProteinID:
AKM20049
LinkDB
All DBs
Position
complement(2727643..2730921)
Genome browser
AA seq
1092 aa
AA seq
DB search
MTFVHLHVSSGYSLFQSTATVEALAAKAKQLGCPALALTDRNVLYGALPFYKECQRHGIR
PIIGVTADIALSGDGAYPLVLLAANEEGYHHVIEISTMIQMGEEKQIDEDALRRLSGGIV
AITPGAEGRVESLLAAGEWQQAKAVLARYQQLFPGCLYVAVQRGERTRAPYEGALRQLAE
EAGVPVVATNDVRYVERGDAAAWRCLQAIRLGVPFADVQEDGGRYLAAPDEMARRFADLP
EALENSAAIADRCELHIPFGGWRLPKFPVPDGETADGYLRRLCEQGLARRVPGADERYWK
RLRHELDVIQAMRFSDYFLIVADVIAYARQRGILIGPGRGSAAGSLVAYALAITDVDPIQ
YGLLFERFLNPERVSVPDIDLDFPDDRREEMIRYAADKYGRDRVAQIITFGTFGAKSALR
ETAKALGIPGREAERVVSLLPDKQGVTIRQWRSESTAFRRAAETVPDGKQWLDIAQTLEG
LPRHTSIHAAGVIISPEPLVRQVPLQPSHGEWPLTQYAMGSLEALGLLKMDFLGLRTLTL
LGQMVRLIERQTGKPFDVRRVPLDDEKTYALLSAGETNGIFQLESSGMKRVLAELRPSEL
EDLVAVNALYRPGPMDMIPAYIRRKRGDEAISYIHPDLEPILAPTYGVLIYQEQIMQIAA
RMAGFSLGQADVLRRAVAKKEKARLAEQREAFVAGCTANGYPKEVAEELYRHIVRFADYG
FNRSHAVSYALLSYAMAYIKAHYPLCFYAAMLSGASGDREKTALYASEAAQKGIPLLPPS
VNRSGYRFAIEGKAIRTGLAAVKHVGTAARLIIEERRERGPFADFFDFAIRLLPKGLPRP
ALEALVLAGAFDEMDGERASLLASIDVAVEHVQLVGPYLDTGGLSLKPKYMDAPPLPPDE
RRKREKELLGFAVTPHPAAVCRPLFQAARAVPIAEMHGSAAVVGGYVAKQRKTRTKRGEE
MAFVTISDESGEVEAVAFPSIYARASDELAEGNFVLLFGTVDRRAGRRQLIIRRAGLLPV
SALYINASRADEAKLSKLKQLLEQQRGATPVYLYDEAKRTLLRLPEQYAVALTAPLVDGL
LALFGFGRIAVK
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttgtgcacttgcatgtgtcaagcggctatagtttgtttcaaagcacggccacc
gtggaagcgctggcggccaaggcgaaacagctcggctgccccgccttggcgttgaccgac
cgcaacgtgctgtatggcgctctgcccttttacaaggagtgccagcgccatggcatccgt
ccgatcatcggcgtgacggccgatattgctctcagcggggacggcgcctatccgctcgtg
ctgttggccgccaatgaggaagggtaccaccatgtaatcgaaatcagcacgatgatccaa
atgggcgaagaaaagcagatcgatgaagacgccctccgccggttgagcggtggaattgtc
gccatcaccccgggggctgaagggcgggtcgagtcgctgctggccgccggggaatggcag
caggcgaaagcggtgctcgcccgctatcaacagctgtttcctggctgtttgtatgtggct
gtccagcgcggcgagcggacgcgcgcaccgtacgaaggagcgttgcggcagttggcggaa
gaagccggggttccggtcgtggcgacgaatgacgtccgttatgttgagcgcggcgacgcc
gcagcgtggcgctgcctgcaggcgatcaggctcggcgtgccatttgctgacgtccaagag
gatggcggccgttatttggcggcgccggatgagatggcgcgccggtttgctgacttgcca
gaagcgcttgagaacagcgcggcgatcgctgatcggtgcgaactgcacatcccgtttggc
ggctggcggctgccgaaatttccggtgcctgacggcgagacggcggacgggtatttacgc
cgtctgtgcgaacaagggctcgcccgccgtgtgccgggcgccgatgagcgttactggaag
cgtctgcggcatgagcttgatgtcattcaggcaatgcgctttagcgattattttttgatt
gtcgccgatgtgattgcctacgcccgccaacgtggcattctcatcggaccgggccgcggt
tcggcggccggctcgctcgtcgcctatgctttggctattaccgatgtcgatccgatccaa
tacgggctgttgtttgagcggtttttgaatccggagcgggtgtcggtgccggatattgat
cttgattttcccgatgaccggcgcgaagaaatgattcgctatgcggcggacaaatacggg
cgcgaccgcgtcgcgcaaatcattacgtttgggacgttcggcgccaagtcggcgctgcgc
gagacggcgaaagcgctcggcattcccgggcgcgaggcggagcgggttgtgtcgcttttg
ccggataaacaaggggtgacgatccgccaatggcgcagcgagtcgaccgcgttccgccgc
gccgccgaaacggtgccggacggcaagcagtggctggatatcgcgcaaacgctcgaaggg
ctgccgcgccatacatcgattcacgcggctggcgtcatcatcagccctgagccgcttgtg
cgccaagtcccgttgcagccaagccatggcgaatggccgctcacgcaatacgccatgggg
tcgctcgaggcgctcggccttctcaaaatggattttctcggcttgcgcacgttgacgctg
ctcgggcaaatggtgcgtctcatcgaacggcagacaggaaagccgtttgatgtgcgtcgc
gttccgcttgacgacgaaaaaacgtatgcgctcctgagcgccggagagacaaacggcatt
tttcagcttgaatcaagcggaatgaagcgtgtgcttgcggaattgcggccgtcggagctg
gaagacttggtcgctgtcaacgccttgtaccggccggggccgatggacatgattcctgct
tatatccggcgcaagcgcggagacgaggcgatttcgtatatccatcctgaccttgagccg
attttggcgccgacttacggagtgctgatctaccaagagcaaattatgcaaatcgccgcc
cgcatggctgggttttcgctcggacaagcggacgtgctccggcgggcggtggcgaaaaaa
gagaaggcgcgtctcgctgaacagcgggaggcgtttgtcgccggctgcacggcgaacggc
tatccaaaggaagttgccgaggaattgtaccggcatatcgtccgcttcgccgattacggc
ttcaaccggagccacgcggtcagctatgcgctgttgtcgtatgcgatggcctacattaaa
gcccactatccgctttgtttttacgcggccatgctctcgggcgcttccggcgaccgggaa
aaaacggctctttacgctagcgaagcagcgcaaaaagggattccgctgctgccgccatcc
gtcaaccggagcggctatcggtttgcgatcgaaggcaaggcgatccgcaccgggctggcg
gcggtgaaacatgtcggcacagcggcgaggctcatcatcgaagagcgtcgggagcgcgga
ccgtttgccgattttttcgatttcgccatccgcctgttgccgaaaggattgccgcgcccg
gcgcttgaggcgctcgttttggccggcgcgtttgatgaaatggacggggagcgggcttcg
cttttagcgagcattgacgtggcggtcgaacacgtgcaattggtcgggccgtacttggac
acaggcggattgtcgctgaagccgaaatacatggatgcccccccgctgccgccggatgag
cggcggaaacgggaaaaagagttgctcgggtttgccgtcaccccacatccggccgcggtc
tgccgcccgctgtttcaagcggcccgggcggtgccgattgccgaaatgcacggttcggcg
gccgtggtcggcggctatgtggccaaacagcggaaaacgagaacgaaacggggggaggaa
atggcgtttgtgacaatcagcgatgaaagcggggaagtggaggcggtcgcctttccgtcc
atttatgcccgcgcctccgatgagctggcggaaggaaactttgtgttgctttttggaacg
gtcgaccggcgcgcaggcaggcgacagctcatcatccgccgcgccggcctcctgcccgtg
tcggcgctatacattaacgcgagccgggccgatgaggccaaattgtccaagctgaaacag
ctgcttgagcagcagcgcggcgctacgccggtctatttgtatgacgaagcgaagcggacg
cttctccgtcttccggagcagtacgccgtcgcgctcacagcgccgcttgtcgatgggctg
ctcgccttattcggcttcgggcgcattgctgtgaaataa
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