Geobacillus sp. 12AMOR1: GARCT_03035
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Entry
GARCT_03035 CDS
T03966
Symbol
csd_2
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea00450
Selenocompound metabolism
gea01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GARCT_03035 (csd_2)
Enzymes [BR:
gea01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
GARCT_03035 (csd_2)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
GARCT_03035 (csd_2)
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GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
SelA
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
AKM20264
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All DBs
Position
complement(2943534..2944754)
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AA seq
406 aa
AA seq
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MNVNDIRALFPILHQDVNGHPLVYFDSAATSQKPLPVIEALDRYYREYNSNVHRGVHTLG
TKATDAYEGAREKVRRFLNAQSAQEIIFTRGTTAALNLVASSYGRANVKEGDEIVITYME
HHSNLIPWQQLAKQTGATLKYIPLQEDGTLDWRDVEATITPAVKIVAIAHVSNVLGTINP
IRDIARLAHERGAVVVVDAAQSAPHMKVDVQELDCDFLALSGHKMCGPTGIGVLYGKKKW
LEQMEPVEFGGEMIDFVELYDSTWKELPWKFEGGTPIIAGAIGLGAAIDFLEQVGLDAIA
AHEHELAQYALERLADIDGVTVYGPKERAGLVTFNIDGVHPHDVATVLDAEGIAIRAGHH
CAQPLMKWLGVTATARASFYLYNTKEEIDRFIAALQKAKEYFSHVF
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaacgacattcgcgcgttgtttccaattttgcatcaggatgtcaacggccat
ccgctcgtttatttcgacagcgcggcgacatcgcaaaagccgctgccggtgattgaggcg
cttgaccgctattaccgcgagtacaactcgaacgtccaccgcggcgtccatacgctcggg
acgaaggcgaccgatgcgtacgaaggcgcgcgcgaaaaagtgcggcggtttttaaacgcc
caatcggcgcaggaaatcatctttacgcgcggcacaaccgctgcgctcaacttggtcgcc
tcaagctacgggcgcgccaacgtcaaagaaggcgacgaaatcgtcatcacgtacatggag
catcacagcaacttgattccgtggcagcagctggcgaaacaaacgggcgcaacgctgaaa
tacattccgctgcaggaagacggcacgcttgattggcgcgacgtcgaagcaacgatcacg
ccggctgtgaaaatcgtcgccatcgcccatgtctcgaacgtgctcggcacgatcaaccct
attcgcgacatcgcccgcctcgcccatgagcgcggcgcggtcgtcgtcgtcgatgcggcg
caaagcgctccgcatatgaaggtcgatgttcaggaacttgattgcgattttctcgccctt
tccggccataaaatgtgcgggccgacgggaatcggcgtattatatggcaaaaagaaatgg
cttgagcagatggagccggtcgagttcggcggcgaaatgatcgattttgtcgagctgtac
gactcgacgtggaaagaattgccgtggaagtttgaaggcggcacgccgatcatcgccggg
gcgattggccttggggcggcgatcgatttccttgaacaagtcggcttggacgccatcgcc
gcccatgaacacgagctggcgcaatatgcgcttgagcggctggctgacatcgacggcgtc
accgtctacggtccgaaagaacgggccgggcttgtcacgttcaacatcgacggggtgcat
ccgcacgatgtggcgacggttcttgacgccgaagggatcgccatccgcgccggccaccat
tgcgcccagccgctcatgaaatggctcggcgtgacggcgaccgcccgggcgagcttttac
ctttacaatacgaaagaggaaatcgaccggttcatcgccgcattacagaaagcgaaggag
tacttcagccatgtcttctaa
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