KEGG   Geobacillus sp. 12AMOR1: GARCT_03197
Entry
GARCT_03197       CDS       T03966                                 
Symbol
mfd_2
Name
(GenBank) Transcription-repair-coupling factor
  KO
K02240  competence protein ComFA
Organism
gea  Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:gea00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gea02044]
    GARCT_03197 (mfd_2)
Secretion system [BR:gea02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   GARCT_03197 (mfd_2)
SSDB
Motif
Pfam: Helicase_C ResIII DEAD AAA_30 AAA_22 Flavi_DEAD Glyco_tran_WecG UvrD-helicase AAA_19
Other DBs
NCBI-ProteinID: AKM20422
LinkDB
Position
complement(3104286..3105677)
AA seq 463 aa
MYILPSSVASPLVSWLNGQRLPREQLPFSADAIDAAIQAGVICEQPGLIKTARGWRCVRC
GNDDPRLFASFPCARCGADCAYCRKCLVMGRISSCTRLVHVTMPLPSEPHEAPLSWDGEL
SAAQAEAAQAVRQAVLDRSELLVWAVCGAGKTEMLFPAIAAALEEGWRVCLATPRTDVVR
ELAPRFRQAFPRVPLAVWHGGSEERGRIASLVLSTTHQLLRAYRVFDVMIVDEVDAFPYS
VEPMLEYAVSQARKERSSLIYLTATPSRAWQRDIARGKRNAVVIPARYHGHPLPVPVFEW
CGNWRKRLERGRLPENVLAWVRHRLEQRKQAFLFVPHIDELEAVVRLLQRVDARIVGVHA
EAPDRAEHVQAFRDGRVPLLVTTTILERGVTVPNIDVAVLGAEDRIFTESALVQIAGRVG
RHAAFPDGDVRFFHHGKTNEMVRARRHIVRMNETAKKRGLLHR
NT seq 1392 nt   +upstreamnt  +downstreamnt
ttgtacattctcccatcttctgttgcttcgccgctcgtttcctggctgaacggtcagcgt
ctcccgcgggagcagctgccgttttccgccgacgcaatcgacgccgctatacaggcgggg
gtgatttgcgaacagcccgggctgatcaaaacagcgcgcggctggcgctgcgtccgctgc
ggaaacgacgatccccgccttttcgcctcatttccgtgcgcccgctgcggggcagattgc
gcgtattgccgcaagtgcttggtgatggggcgcatcagctcctgcacccgccttgtgcac
gtgacgatgccgcttccgtccgagccgcacgaagcgccgctttcctgggacggggaactg
tccgccgctcaggcggaggctgcccaggcagtccgccaggcggtgctggaccgaagcgag
ctgctcgtttgggccgtatgcggggcagggaaaaccgagatgttgtttcccgccatcgct
gccgccttggaggaaggttggcgcgtttgcctcgctacgccgcggaccgatgttgtccgc
gaactggctccccgctttcgccaagcgttcccgcgcgttccgctcgctgtttggcacggc
ggaagcgaagagcgcgggcggatcgcttctttggtcctctccaccacccaccagttgctg
cgggcctaccgcgtctttgacgtcatgatcgtcgatgaagtcgacgccttcccgtattcg
gttgaaccgatgcttgaatacgccgtcagtcaagcgcggaaagaacgatcaagcctcatc
tatctcaccgccactccctcccgcgcttggcagcgtgacattgcgcgtggcaaacggaac
gccgtcgtcatccccgcccgctatcacggtcatccgctccccgtccccgtgttcgaatgg
tgcggcaattggcgcaaacggttagagcgcggccgcttgcccgaaaacgtccttgcgtgg
gttcgccatcgtttggaacagagaaagcaggcgtttttgttcgttcctcatatcgatgag
cttgaggcggtcgtccgcctgttgcaacgagtcgatgcccgcatcgtcggcgttcacgcc
gaagccccggatcgcgccgaacatgtgcaggcgtttcgcgacgggcgcgttccgctgctt
gtgacgacgacgattcttgagcgcggcgtgacggtgccgaacatcgatgtcgccgttctc
ggtgccgaagaccgcatctttacggaaagcgctctcgtgcaaatcgccggccgcgtcggc
cgccacgcggcgtttccggatggcgacgtccgctttttccatcacggaaaaacgaacgag
atggtgcgggcgcgccgccacattgtccgcatgaatgagacagcgaagaaaagggggttg
ctgcatcgatga

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