Geobacillus sp. 12AMOR1: GARCT_03273
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Entry
GARCT_03273 CDS
T03966
Symbol
lytC
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase LytC precursor
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
GARCT_03273 (lytC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gea01011
]
GARCT_03273 (lytC)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gea03036
]
GARCT_03273 (lytC)
Enzymes [BR:
gea01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
GARCT_03273 (lytC)
Peptidoglycan biosynthesis and degradation proteins [BR:
gea01011
]
Peptidoglycan biosynthesis and degradation
Amidase
GARCT_03273 (lytC)
Chromosome and associated proteins [BR:
gea03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GARCT_03273 (lytC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
SH3_3
SH3_4
SH3_16
SH3_2
Motif
Other DBs
NCBI-ProteinID:
AKM20498
LinkDB
All DBs
Position
complement(3197313..3198653)
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AA seq
446 aa
AA seq
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MRRGIWLALLFCLLWLAAAAWPVGAKGESGKTAQLAVVTADQVNVRQGPGVPYRPLANVH
RGEAYRLIEVKDGWVNIEWKPNRTGWIAARYVALAKETAIVQENRLRLRQEPSRDGRIIG
HLARGETVWIIKEDGEWTEVIADGAIGWVSSAYLTAARESSISHQTGIVNASSLNVRAEP
SLHAPRIGRLVRGEEVEIVEKKPGWYKIASQTGLDGWVSSAYVQVKGGQANEKEAEAPQS
ADRSLPSIIAPSDSRLYADSWTSGPVQALAGKTIVLDAGHGGKDGGAQSVDGIKEKELTL
ETAKLLKNKLQSYGARVVLTRSSDEYVPLSARVAAARLYQADAFISLHYDSAADSDASGI
TIYYYDRFADYELAQSFQGLFRQLSALPFRGIAFGDYYVLRENEKPSVLLELGYVSNRSD
AAVVATNGYQEAVTTAIVNAMRHYFQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaggaatatggctcgccctgttgttttgtttgctatggctggctgcggctgct
tggccggtgggggcgaaaggggagagtgggaaaaccgctcagttggcggtggtgacggcg
gatcaggtgaacgtccgccaagggccgggggtgccataccgtccattggcgaacgttcac
cgcggcgaggcgtatcggctgatcgaggtcaaggatggatgggtgaacatcgagtggaaa
ccgaatcgaaccgggtggatcgccgcgcggtacgtcgcgttggcaaaagagacggccatc
gtgcaagaaaaccgactccgccttcgacaagagccgagccgagatgggcgaattatcggg
catttggcgcggggagaaacggtatggatcatcaaggaagatggggaatggacggaagtg
atcgcagacggtgcgatcggctgggtgtcttcagcatacctcactgcagctcgggagtca
tcgatttcgcatcaaaccggaatcgtcaacgccagttcactcaacgtgcgggctgagccg
tcgcttcacgccccgcggatcggccgccttgtccggggcgaagaggtcgagattgtggaa
aagaaaccgggatggtacaaaattgcctcccaaacagggcttgatgggtgggtgtcatcc
gcatatgtgcaggtaaagggtggacaagctaatgaaaaggaagcggaagcgccccagtcg
gctgaccgctcgctgccttccatcatcgcgcctagcgactcgcgcctttatgcagacagc
tggacgagcggtcctgttcaggcgctggccggaaaaacgatcgtccttgacgctggccac
ggaggtaaagacggcggggcccaaagtgtcgatggcatcaaggaaaaggagttgacgttg
gaaaccgccaagcttctgaaaaacaagctgcaatcttacggcgcccgcgtcgtgctgacg
cgctctagcgatgagtatgtgccgctgtcggcgcgtgttgccgccgcccgcctgtatcag
gcggacgcgtttattagcttgcattacgacagcgccgctgattcagatgcgtccggcatc
accatttactattacgatcggtttgcggactacgaattggcgcaatcgttccaagggctg
ttcaggcaactttccgcattgccgtttcgcggcatcgcctttggcgactattacgtgttg
cgagaaaacgagaagccgtccgtgttgcttgagctcggctatgtaagcaatcggtcggac
gctgcggttgtggcgacaaacggttatcaagaagcggtgacgacggccatcgtgaacgcc
atgcgccattattttcaatag
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