Geobacillus sp. 12AMOR1: GARCT_03293
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Entry
GARCT_03293 CDS
T03966
Symbol
ykuD_2
Name
(GenBank) Putative L,D-transpeptidase YkuD
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
gea
Geobacillus sp. 12AMOR1
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gea01002
]
GARCT_03293 (ykuD_2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gea01011
]
GARCT_03293 (ykuD_2)
Peptidases and inhibitors [BR:
gea01002
]
Cysteine peptidases
Family C82
GARCT_03293 (ykuD_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
gea01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GARCT_03293 (ykuD_2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
AKM20518
LinkDB
All DBs
Position
3222191..3222688
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AA seq
165 aa
AA seq
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MYKHIVKHGETIASIARDYRTSVEALLRANGLTASSVIFPGQGIVIPHLPPKGSIPYTIH
ISISRRQLTLKHQGRTIRTYPVGVGKMVTATPVGDFVIVNRQPNPGGPFGAMWLSLSKLH
YGIHGTNDPSSIGKYVSKGYIRMHNKDVLELASIVPNGTEVFIRP
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaacatatcgtcaaacacggggaaacgatcgcctccatcgcccgcgactaccgc
acatctgttgaggcgctccttcgcgccaacggcctcaccgcctcgtccgtcatcttccct
ggccaggggatcgtcatcccccaccttccgccgaaaggatcgattccgtacacgatccac
atttcaatcagccgccgccagctgacgttaaaacaccaagggcggacgatccgcacgtat
cccgtcggcgtcgggaaaatggtcaccgccacccccgtcggcgactttgtcatcgtcaac
cgccagccaaacccaggcgggccgttcggcgcgatgtggttaagcttatccaaactccat
tacggcatccacggcacgaacgacccgtcctcgatcggcaaatacgtatccaaaggctac
atccgcatgcacaacaaagacgtgctcgagctcgcctccatcgtcccgaacggaacggag
gtgttcatccgtccgtga
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