Geobacillus sp. 12AMOR1: GARCT_03405
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Entry
GARCT_03405 CDS
T03966
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GARCT_03405 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gea03400
]
GARCT_03405 (ung)
Enzymes [BR:
gea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GARCT_03405 (ung)
DNA repair and recombination proteins [BR:
gea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GARCT_03405 (ung)
Prokaryotic type
GARCT_03405 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKM20630
LinkDB
All DBs
Position
complement(3333273..3333962)
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AA seq
229 aa
AA seq
DB search
MPILKNDWAPLLEEEFQKPYYLKLREFLKEEYRTRTIYPDMHDIFNALHYTPYANVKVVL
LGQDPYHGPGQAHGLSFSVKPGVPVPPSLANIFKELHDDLGCYIPDNGYLVKWAEQGVLL
LNTVLTVRRGQANSHRGKGWEYFTDRVIELVNEKDDPVVFLLWGRNAQEKKERITNPRHL
IIEAPHPSPFSAARGFFGHRPFSRTNAFLTKHGREPIDWQIENIGARAE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgccgattctcaaaaacgactgggctccgctgcttgaagaggagtttcaaaagccgtac
tacttaaagctgcgcgagtttttaaaagaggagtaccggacgcggacgatctatcccgat
atgcacgatattttcaacgcccttcattatacaccgtatgcaaacgtcaaagtcgtgctg
ctcgggcaagatccgtaccacggcccgggacaggcgcacgggcttagtttttccgtcaag
ccgggcgtgccggtgccgccgtccttagcgaacatttttaaagagctgcatgacgacctc
ggctgctatataccagataacggctatctcgtcaaatgggccgagcaaggggtgctgttg
ttaaacaccgtgctgaccgtccgccgcggccaggcgaactcccatcgcggcaaagggtgg
gaatatttcaccgaccgcgtcattgagctcgtcaacgaaaaagacgatccggtcgtcttt
ttgctttggggccggaacgcgcaagagaaaaaagaacggattacgaatccgcgccatctg
attattgaagcgccgcacccgagcccgttttccgccgcgcgcggctttttcggccatcgc
ccgttttcgcggacgaacgcgtttttaaccaagcacggacgcgaaccgatcgattggcaa
atcgagaacatcggcgcccgagctgaatga
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