Geobacter sp. M18: GM18_0130
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Entry
GM18_0130 CDS
T01421
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
geb
Geobacter sp. M18
Pathway
geb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GM18_0130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geb03019
]
GM18_0130
Enzymes [BR:
geb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GM18_0130
Messenger RNA biogenesis [BR:
geb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GM18_0130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ADW11619
UniProt:
E8WL39
LinkDB
All DBs
Position
complement(156465..157880)
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AA seq
471 aa
AA seq
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MNTNMEKVIIPRAEHAISRSLLSPNGVKVLYKLKEHGFVAYLVGGGVRDLLLGREPKDFD
VVTDATPAQLKKLFRNCRLIGRRFRLAHLHFHDEIIEVATFRSTVDAAEAAAEEAPEAVP
EPSEAELLEHEREGRRRGHHGPKMLKSEDGMVLRDNVFGTPEEDAIRRDFTVNALFYSIA
DFSIIDHVGGMEDLKNGLIRTIGDPMVRFTEDPVRMIRAIRFASMLGFNIEPRTEAAIEE
LCGTINKATPPRLYEEVLKLLLMGAGERTYQMLRHSGLFEPLFPHFDAWLSRESDCYPHV
RVGKALEWVDSQIGQGVAVSPHLLVALMFGEYLEEKVAQLRDEGLPPQQATDAAVAAFAG
ELAQTVAVPNRVLVTVRDILNLQHRFQKTPGRNGRGVLARPAFHDALQYLRFIEQLTAPK
KSLADWWERYAAQQLEGEAPVPEAQEAASEAPKKKKRRRRRRKKPAPAPAS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaacactaacatggaaaaagtcatcatccctcgcgccgagcacgccatctcgcgctcg
ctgttgagccctaacggcgtaaaggtgctctacaagctcaaggagcacggcttcgtcgcc
tacctggtcggcggcggagtgcgcgatctgctcctggggcgcgagcccaaggatttcgac
gtcgtcaccgacgcgacccctgcgcagctcaaaaaactcttccgcaactgccgcctgatc
ggccggcgctttcgcctggcccaccttcatttccacgacgagatcatagaggtcgccacc
ttccgctccacggtcgatgcagccgaagctgccgccgaagaggcacctgaggccgttccc
gaaccgtccgaggcggagctcttggaacatgaacgcgaggggaggcggcgcggccaccac
gggccgaagatgctgaagagcgaggacggcatggtgctcagggacaacgtcttcggaaca
cccgaggaggatgcgatccgccgcgatttcaccgtcaacgccctgttctacagcatcgcg
gacttctccatcatcgaccacgtgggggggatggaggacctgaagaacggcctgatccgc
accatcggcgatcccatggtccgtttcaccgaagatccggtgcgcatgatccgcgccatc
cggttcgcctccatgctcggcttcaacatcgagccccgtaccgaggccgccatcgaggag
ctctgcggcaccataaacaaggccactccgccgcgactctacgaagaggtgctcaaactc
ctgctgatgggggccggcgagcggacctaccagatgctgcgccacagcggcctctttgag
ccgctcttcccccacttcgatgcctggctttcccgcgagtccgattgctacccccacgtc
agggtgggcaaggcgctggaatgggtcgacagccagatcggccagggggtggcggtatcc
cctcaccttctggtcgccctgatgttcggggagtacctggaggagaaggttgcgcagttg
cgcgacgaggggcttcccccgcagcaggcgaccgatgccgctgtggccgcctttgccggg
gagctggcacagaccgtcgcggtgcccaaccgggtgctggtgacggtacgtgacatcctc
aacctgcagcaccgcttccagaagactcccggaagaaacggccgcggcgtgctggcacgc
cccgccttccacgacgcgctgcagtacctccgtttcatcgagcagctcaccgcgccgaaa
aagtccctggcggattggtgggagcgctacgccgcgcagcagcttgagggcgaagccccg
gtgcctgaagctcaggaggccgcctccgaggctccgaaaaagaaaaagcgccggagacgg
cggcggaaaaaacccgcaccggcaccagcgtcgtaa
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