Geobacter sp. M18: GM18_0239
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Entry
GM18_0239 CDS
T01421
Name
(GenBank) putative PAS/PAC sensor protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
geb
Geobacter sp. M18
Pathway
geb03030
DNA replication
geb03430
Mismatch repair
geb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GM18_0239
03430 Mismatch repair
GM18_0239
03440 Homologous recombination
GM18_0239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
geb03032
]
GM18_0239
03400 DNA repair and recombination proteins [BR:
geb03400
]
GM18_0239
Enzymes [BR:
geb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GM18_0239
DNA replication proteins [BR:
geb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GM18_0239
DNA repair and recombination proteins [BR:
geb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GM18_0239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
HAMP
PAS
PAS_8
Med11
PAS_4
CC_Cfap43
DEDDh_C
GMIP-like_FCH
PLC-beta_C
Motif
Other DBs
NCBI-ProteinID:
ADW11728
LinkDB
All DBs
Position
complement(284994..287501)
Genome browser
AA seq
835 aa
AA seq
DB search
MTTSPGNGSRRRSNSLRRRLVLSLLGLALIPLLAALAALFFVVREDVGELQGRRLSQEAG
QLAEHLRAELYRNSKDTTGPVPLAEITKLLVQKQGELAREGEVGALVLFSADGRRLAGNP
QVPIPPLPDGEHGWVSFGSGGESYFAGVKPVPTPDASPGKWFLAVVQPGSKVFEHLYSVS
YQAGLFLAMFMAAVATMAWRLADQYMRPIAEIRRGAEIVSRINLEHRIKVDTGDEMEELA
NEFNLMAEKLGRVYHELEDRVREATRTVQEERNRLATVLRTMVDGVVVANEAGEIILMNP
RARMILDRGYSSGIGAQLSGIFPSDRLGFHLKRLRKAWAPGREAVEEVVLPLSCGKLLRG
SLSVIPGPEAERAGFLLVFRDLSAPTEEGKLFEETLRAMPRLLKGPVATSRSLVEALQRH
RNMAEEKQRAFLAALEEEQVRLSERILALEEAAAAARTSRWPAVPSHPAELLQEALESAP
GATFSAEAAGALPMVQVEPFSWVASLCRILEWIEKGNAGGFRVEAGLKEEEGSVVTSFRL
LGPFRGDPAELESLLVSPAGEEPLSLGETVRRNRGELWTRSRESSLEVRLALLQTSAAVL
PRSGNGLIEGEPEFYDFDLFLPRPVLERVDLLRADLADLEYVVFDTETTGLQISQGDKVV
SISAVRIRRGKVQNADIFHTLVNPGRHIPAESTAFHRIEDHMVADAPSMNEVYPQFVKYA
GDAVLVAHNAAFDKKCLDMAAAEAGLPLVENPILDTLFLSVGLHSGTEGHSLDAMAQRMG
IAIEGRHTSLGDARATAQIFLGLLSLLPGRGVRTLAEAKAFCDANLLLRWQSSRF
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctctccgggaaacggctcccggcgcaggagcaacagcctccgccgccgcctg
gtgctctcgctcctggggctcgcactgataccgcttctagcagcgcttgccgccctgttc
ttcgtggtccgcgaggacgtgggggagctccaggggcgccgcctgtcgcaggaagcgggt
cagttggcggagcacctgcgggcggagctgtaccggaactctaaggatacgaccggtccg
gttcccctggcggagatcaccaagctgctggtgcagaagcagggggagctcgcccgggaa
ggagaggtcggtgccctggtgctcttcagcgccgatgggcgccgcctggccggaaacccg
caggtcccgatccccccgctgccggacggggagcacggctgggtcagcttcggaagcggc
ggcgaaagctacttcgccggggtgaagccggtgccgacgcccgacgcctccccggggaag
tggttcctcgccgtggtgcagccaggctccaaggtgttcgagcacctttactcggtcagc
taccaggccgggctgttcctggccatgttcatggcggcggtcgccaccatggcctggcgg
ctggcggaccagtacatgcgcccgatagcggagatccggcgcggcgcggaaatcgtctcc
cgcatcaacctggagcaccggatcaaggtcgacaccggcgacgagatggaggagctcgcc
aacgagttcaacctgatggccgagaagctgggacgggtctaccacgagctcgaagaccgg
gtgcgcgaagccacccggaccgtgcaggaggagcgcaaccgcctggcgacggtgctgcgc
accatggtggacggcgtggtggtggccaacgaggccggcgagatcatactgatgaacccc
agggcgcggatgatcctggaccggggctacagctccggcatcggcgcgcagctctccggc
atcttcccgagcgaccggctcggcttccacctgaagcgcctgcgcaaggcgtgggcaccc
ggacgcgaggcggtggaggaggtggtgctccccttgagctgcggcaagctcctcagggga
tcgctctcggtcatacccggcccggaagcggagcgggcggggtttctcctggtgtttcgc
gacctgagcgccccgacggaagaggggaaactgttcgaggaaaccctgcgggccatgccg
cggcttctcaagggaccggtggcaacctcccgctcgctggtggaagccctgcagcgtcac
aggaacatggccgaggagaagcagcgggccttcctcgcggcgctggaagaggaacaggtc
cgactgagcgagcgtatcctggcccttgaggaagcagccgccgcggcgcgcacctcgcgc
tggcccgccgtcccctcccaccccgccgagcttttgcaggaggcgctggagtcggccccg
ggggcgaccttctccgccgaggcggcgggggcgctcccgatggtgcaggtcgagcccttc
tcctgggtcgcctccctgtgccgcatccttgagtggatcgaaaaggggaacgcggggggc
ttccgcgtcgaggcggggctcaaagaggaagaggggtcggtggtcaccagcttccggctc
ctcggcccgtttcgcggcgaccccgcagaactcgaatcgctgctggtctccccggccggg
gaggagccgctctccctgggagagaccgtgcgcagaaaccgcggcgagctctggacccgt
tcccgggaaagctccctggaggtgcggctcgccctgctgcagacgagcgccgcggtcctg
ccgcgcagcggcaacggcctgatcgagggggagccggagttctacgacttcgacctgttc
ctcccccggccggttctggagcgggtggatctgctccgggccgatctggcggatctggag
tacgtggtgttcgacaccgagaccaccgggctgcagatctcccagggggacaaggtagtc
agcatcagcgccgtgcgcatccggcgcgggaaagtgcaaaacgccgacatcttccacacg
ctggtcaaccccgggcgccacatcccggccgagtcgacggcgttccaccggatagaggac
cacatggtggccgacgccccttccatgaacgaggtctacccgcagttcgtgaagtacgcg
ggggacgcggtcctggtggcgcacaacgcggccttcgacaagaagtgcctcgacatggcc
gcggccgaggcggggctccctctggtggagaacccgatcctcgacaccctgtttctttcc
gtcgggctgcacagcgggaccgagggacacagcctggacgccatggcccagcggatgggg
atcgccatcgagggaaggcacacctccctaggggacgcccgcgcgacggcccagatcttt
ctggggctcctctcgctgctccctgggcgcggcgtgcgcaccctcgccgaggccaaggcc
ttctgcgacgcgaacctgcttctgcgctggcagtcgtcccggttctga
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