Geobacter sp. M18: GM18_0274
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Entry
GM18_0274 CDS
T01421
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
geb
Geobacter sp. M18
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
geb03016
]
GM18_0274
Enzymes [BR:
geb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GM18_0274
Transfer RNA biogenesis [BR:
geb03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GM18_0274
Prokaryotic type
GM18_0274
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
ADW11763
UniProt:
E8WMQ3
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All DBs
Position
complement(331254..332261)
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AA seq
335 aa
AA seq
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MTPHFLPTLVNPPFGDPGVYIDFQFARRAILFDLGEIHRLAPRKILRLTDVCISHTHIDH
FIGFDLMLRIMLGRDMTLRLFGPPGILSQVEHRLASYSWNLIQSYPTEFVITVTELHPDG
SALRARFSSRRVFSRECEERLLFKDGVILEEENLRLRAAFLEHSIPCLAYAFEEKLHVNF
MKNRLTELGLPVGPWLSEVKRAVLRGEPDQTVVKASLPGEGGERRFTIAELKEKVLQVVP
GEKIAYVTDTAFTPENRRRIVELSRGADYLFIEAVFLHVDAERARERAHLTARQAGTLAR
EAGAVRAIPFHFSPRHLEAEQELRREVAEAFEGNS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgactccccacttccttcccacgctggtgaaccctcccttcggggacccgggcgtctac
atagatttccagttcgcccggcgcgcgatcctcttcgacctgggggagatccaccgcctc
gccccacgcaagatcctgcgcctcaccgacgtctgcatctcccacacccacatagaccat
ttcatcggcttcgacctgatgctgcgcatcatgctggggcgcgacatgaccttgcggctc
ttcggcccccccggcatcctgagtcaggtcgagcaccggctcgcctcctacagctggaac
ctgatccagagctaccccaccgaattcgtcattaccgtcaccgaactgcaccccgacggc
agcgccctgcgggcccgcttcagttcgcgccgcgtcttctcccgcgagtgcgaggaacgg
ctcctgttcaaggacggggtgatcctggaagaggagaacctgcgcctgcgcgcggccttc
ctggagcacagcatcccctgcctggcctatgccttcgaggagaagctccacgtgaacttc
atgaagaacaggctgacagagttagggctcccggtcgggccatggctttccgaggtgaag
cgcgcggtgttgcggggagaaccggatcagacggtagtaaaggcttctttgccgggcgaa
ggcggggagcggcgtttcaccatcgcggagctgaaggaaaaggtactgcaggtggtaccg
ggagaaaagatcgcctacgtgaccgacacggccttcactccggagaaccgccgccgtatc
gtggagctctcgcggggagcggattacctcttcatcgaggcggtgttcctgcacgtcgac
gcggagcgcgcccgcgagcgggcgcaccttacggcccggcaggcgggaacactggcacgg
gaggccggcgcggtgcgggccatcccctttcacttctcccccaggcatctggaggccgag
caggaattacgccgggaggtggccgaggccttcgaggggaacagctga
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