Geobacter sp. M18: GM18_0278
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Entry
GM18_0278 CDS
T01421
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
geb
Geobacter sp. M18
Pathway
geb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GM18_0278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geb03019
]
GM18_0278
03110 Chaperones and folding catalysts [BR:
geb03110
]
GM18_0278
03029 Mitochondrial biogenesis [BR:
geb03029
]
GM18_0278
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
geb04147
]
GM18_0278
Enzymes [BR:
geb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GM18_0278
Messenger RNA biogenesis [BR:
geb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GM18_0278
Chaperones and folding catalysts [BR:
geb03110
]
Heat shock proteins
HSP60 / Chaperonin
GM18_0278
Mitochondrial biogenesis [BR:
geb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GM18_0278
Exosome [BR:
geb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GM18_0278
Exosomal proteins of other body fluids (saliva and urine)
GM18_0278
Exosomal proteins of breast cancer cells
GM18_0278
Exosomal proteins of colorectal cancer cells
GM18_0278
Exosomal proteins of bladder cancer cells
GM18_0278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
divDNAB
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
ADW11767
UniProt:
E8WMQ7
LinkDB
All DBs
Position
333823..335466
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKIIKFDQEARNCILKGVNTLADAVKVTLGPKGRNVVIEKSYGAPLITKDGVTVAKEI
ELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGAKLVAAGHNPMEIKRGL
DQAVETLVAELKNISKPIKDHKEIAQVGTISANNDKTIGDIIAQAMEKVGKEGVITVEEA
KAMETTLETVEGMQFDRGYLSPYFVTDPERMEAAMENVSILIHDKKISNMKDLLPVLEQT
AKSGRPLLIIAEDIEGEALATLVVNKLRGVLNVCAVKAPGFGDRRKAMLEDIAVLTGGKV
ISEEVGFKLENTTIDMLGNAKKITVDKDNTTIIDGFGAEADIQGRVKMIRAQVEETTSDY
DREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVDEGIVPGGGVAYL
RALKVLDNLQLSPEQQFGVNVIKRAVEEPIRQIAQNAGVDGSIVVDKVKNGEGSFGYNAA
DDVYVDMLEAGIIDPTKVSRYALQNAASVAGLMMTTEAMIAEKPREESAMPAMPGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaagatcatcaaattcgaccaggaggcacgcaactgcatcctcaaaggcgtc
aacaccctggcagatgcggttaaagtgaccctgggccccaaagggcgcaacgtcgtcatc
gagaagtcctacggcgcaccgctcatcaccaaggacggcgtcaccgtcgccaaagagatc
gagctggaggacaagttcgagaacatgggcgcacagctggtgaaggaagtcgcttccaag
acctctgacgtcgcaggtgacggcaccaccaccgctaccgtcctcgcccaggccatctac
cgccagggcgccaagctggtcgctgccggccacaacccgatggagatcaagcgcggcctc
gaccaggccgtcgagaccctggtcgccgagctgaagaacatctccaagccgattaaggac
cacaaggaaatcgcacaggtcggcaccatctctgccaacaacgacaagaccatcggcgac
atcatcgcccaggccatggagaaggtcggcaaggaaggggtcatcaccgtcgaggaagcc
aaggcgatggagaccaccctcgagaccgtcgaggggatgcagttcgaccgcggctacctc
tccccctacttcgtgaccgacccggagcgcatggaagctgccatggaaaacgtcagcatc
ctgatccacgacaagaagatctccaacatgaaggacctcctcccggttcttgagcagacc
gccaagtccggccgtccgctcttgatcatcgccgaggacatcgagggcgaggccctggcc
accctggtggtcaacaagctgcgcggcgtgctgaacgtctgcgccgtcaaggccccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccgtcctcaccggcggcaaggtg
atctccgaggaagtcggcttcaaactcgagaacaccaccatcgacatgctgggtaacgcc
aagaagatcaccgtcgacaaggacaacaccaccatcatcgacggcttcggcgcagaggcg
gacatccaggggcgcgtcaagatgatccgtgcccaggtcgaggagaccacctccgactac
gaccgcgagaagctccaggagcgcctggccaagctggtcggcggcgtagccgtgatcaag
gtcggtgctgccactgagatcgagatgaaggagaagaaggcacgcgtcgaggatgccctc
cacgcaacccgcgctgcggtcgacgaggggatcgtccctggcggcggcgtggcctacctg
cgcgcccttaaggtgctggacaacctccagctctcccccgagcagcagttcggcgtcaac
gtgatcaagcgcgccgtcgaggagccgatccgtcagatcgcacagaacgccggcgtggac
ggttccatcgtcgtcgacaaggtgaagaacggtgagggctccttcggctacaacgcggcc
gatgacgtctacgtcgacatgctggaggccggcatcatcgacccgaccaaggtgtcccgc
tacgccctgcagaacgccgcttccgtggccggtctcatgatgaccaccgaggcgatgatc
gcagaaaagccgagggaagagtcggcaatgccggcaatgccgggcggcatgggcggcatg
ggtggcatgggcggcatgatgtaa
DBGET
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