KEGG   Geobacter sp. M18: GM18_0278
Entry
GM18_0278         CDS       T01421                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
geb  Geobacter sp. M18
Pathway
geb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:geb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GM18_0278
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:geb03019]
    GM18_0278
   03110 Chaperones and folding catalysts [BR:geb03110]
    GM18_0278
   03029 Mitochondrial biogenesis [BR:geb03029]
    GM18_0278
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:geb04147]
    GM18_0278
Enzymes [BR:geb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     GM18_0278
Messenger RNA biogenesis [BR:geb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     GM18_0278
Chaperones and folding catalysts [BR:geb03110]
 Heat shock proteins
  HSP60 / Chaperonin
   GM18_0278
Mitochondrial biogenesis [BR:geb03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    GM18_0278
Exosome [BR:geb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   GM18_0278
  Exosomal proteins of other body fluids (saliva and urine)
   GM18_0278
  Exosomal proteins of breast cancer cells
   GM18_0278
  Exosomal proteins of colorectal cancer cells
   GM18_0278
  Exosomal proteins of bladder cancer cells
   GM18_0278
SSDB
Motif
Pfam: Cpn60_TCP1 divDNAB SHOCT-like_DUF2089-C
Other DBs
NCBI-ProteinID: ADW11767
UniProt: E8WMQ7
LinkDB
Position
333823..335466
AA seq 547 aa
MAAKIIKFDQEARNCILKGVNTLADAVKVTLGPKGRNVVIEKSYGAPLITKDGVTVAKEI
ELEDKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYRQGAKLVAAGHNPMEIKRGL
DQAVETLVAELKNISKPIKDHKEIAQVGTISANNDKTIGDIIAQAMEKVGKEGVITVEEA
KAMETTLETVEGMQFDRGYLSPYFVTDPERMEAAMENVSILIHDKKISNMKDLLPVLEQT
AKSGRPLLIIAEDIEGEALATLVVNKLRGVLNVCAVKAPGFGDRRKAMLEDIAVLTGGKV
ISEEVGFKLENTTIDMLGNAKKITVDKDNTTIIDGFGAEADIQGRVKMIRAQVEETTSDY
DREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVDEGIVPGGGVAYL
RALKVLDNLQLSPEQQFGVNVIKRAVEEPIRQIAQNAGVDGSIVVDKVKNGEGSFGYNAA
DDVYVDMLEAGIIDPTKVSRYALQNAASVAGLMMTTEAMIAEKPREESAMPAMPGGMGGM
GGMGGMM
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggcagcaaagatcatcaaattcgaccaggaggcacgcaactgcatcctcaaaggcgtc
aacaccctggcagatgcggttaaagtgaccctgggccccaaagggcgcaacgtcgtcatc
gagaagtcctacggcgcaccgctcatcaccaaggacggcgtcaccgtcgccaaagagatc
gagctggaggacaagttcgagaacatgggcgcacagctggtgaaggaagtcgcttccaag
acctctgacgtcgcaggtgacggcaccaccaccgctaccgtcctcgcccaggccatctac
cgccagggcgccaagctggtcgctgccggccacaacccgatggagatcaagcgcggcctc
gaccaggccgtcgagaccctggtcgccgagctgaagaacatctccaagccgattaaggac
cacaaggaaatcgcacaggtcggcaccatctctgccaacaacgacaagaccatcggcgac
atcatcgcccaggccatggagaaggtcggcaaggaaggggtcatcaccgtcgaggaagcc
aaggcgatggagaccaccctcgagaccgtcgaggggatgcagttcgaccgcggctacctc
tccccctacttcgtgaccgacccggagcgcatggaagctgccatggaaaacgtcagcatc
ctgatccacgacaagaagatctccaacatgaaggacctcctcccggttcttgagcagacc
gccaagtccggccgtccgctcttgatcatcgccgaggacatcgagggcgaggccctggcc
accctggtggtcaacaagctgcgcggcgtgctgaacgtctgcgccgtcaaggccccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccgtcctcaccggcggcaaggtg
atctccgaggaagtcggcttcaaactcgagaacaccaccatcgacatgctgggtaacgcc
aagaagatcaccgtcgacaaggacaacaccaccatcatcgacggcttcggcgcagaggcg
gacatccaggggcgcgtcaagatgatccgtgcccaggtcgaggagaccacctccgactac
gaccgcgagaagctccaggagcgcctggccaagctggtcggcggcgtagccgtgatcaag
gtcggtgctgccactgagatcgagatgaaggagaagaaggcacgcgtcgaggatgccctc
cacgcaacccgcgctgcggtcgacgaggggatcgtccctggcggcggcgtggcctacctg
cgcgcccttaaggtgctggacaacctccagctctcccccgagcagcagttcggcgtcaac
gtgatcaagcgcgccgtcgaggagccgatccgtcagatcgcacagaacgccggcgtggac
ggttccatcgtcgtcgacaaggtgaagaacggtgagggctccttcggctacaacgcggcc
gatgacgtctacgtcgacatgctggaggccggcatcatcgacccgaccaaggtgtcccgc
tacgccctgcagaacgccgcttccgtggccggtctcatgatgaccaccgaggcgatgatc
gcagaaaagccgagggaagagtcggcaatgccggcaatgccgggcggcatgggcggcatg
ggtggcatgggcggcatgatgtaa

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