Geobacter sp. M18: GM18_0422
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Entry
GM18_0422 CDS
T01421
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
geb
Geobacter sp. M18
Pathway
geb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GM18_0422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geb03400
]
GM18_0422
Enzymes [BR:
geb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GM18_0422
DNA repair and recombination proteins [BR:
geb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GM18_0422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ADW11905
UniProt:
E8WPC6
LinkDB
All DBs
Position
complement(530272..533520)
Genome browser
AA seq
1082 aa
AA seq
DB search
MPLNIYTSNLMEHLVDRLEQVVRAPRSAPGTPFDKELIVVQSKGMQRWLSMELAGRIGVW
ANGEFLFPNRFVEEVFARVLPDSPAEAPLFAPEVMTWRILGLLQQVTSKPGFEEIAGYLS
DDADGLKRMQLAQRIADTFDRYTIYRPEKLLQWEEGAEEHWQAQLWRALSDGVTQKHRAR
LLHDFRKALESGRLPEQRRISVIGIPSLPPFHLEVLARIAQYGEVNLFLLNPCRQYWGEI
VSERELARLEKRGEGAEQWYETGNPLLASWGKLGRDFFEAIIDGCGEHERRDSFPELPQG
SLLHEVQADIVELRGAEAGLRTVSAHDLSLKVHSCHSPMREVEVLYDTLLSIFDADPSLS
PRDVLVMTPDIEAYAPYISAVFQNPEEGGERIPYSIADRSLKNEGEAAQALLAILGLCGG
RYGVATVLDILESPPVARRFNLSEDDLETVRDWLRGANIRWGIDAEQRTEHGVPPFRENS
WAAGLDRLLLGYAMNGDGRSFYNGILPFDDMEGGVALVFGRFLAFCERLFGETRALARPR
VPSEWVPALRQILDDFILPDQEGERELLSLIEIAKKLGECGNQAGFEGQVGIEVVRYWLE
QQLGSSERGLGFLTGGVTFCAMLPMRSIPFPVVALIGMDEGQFPRRNPAQGFDLMTAERR
AGDRSPRDEDRYLFLEALLSTRKRLHISYVGQSIKDNKELPPSVLVSELLDYLERCFVTS
NGTPAGAVLHHPLQPFSQKYFTGNPALFSYSRRNCAGAAAKMSPPSTPPPFLEAPLSPWE
EESTVTLKALIDFLCNPAKELLRRRLGIRIEQGAEPLEEAEPFSLPTLTKYQLEQEMVTA
LLRGEDLDVPYAVACAQGDLPPGVCGSALFRKLGEPATEFAAKVAEVASAEPLPPLDIDL
KLSGGRILGRIENLRSDRMVRYRYTKLKAKDQLRLWVEHLALNCARAVGYPLQSTFVAAD
STIHFPPVDECAEQLERLLELYRKGMTCPLKFFPETSLEYARKSRDPKKAGKALTDALGK
WRGSEFFEGEGKDDHCRRCFGDEAPLDEEFTAVALQIWGPLLDHQTNALTPTLSRRERED
KT
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgaatatttacaccagcaaccttatggagcacctggtggaccgcctggagcag
gtggtccgcgcgccgcgcagcgcccccggcaccccgttcgacaaggagttgatcgtggtg
caaagcaaggggatgcagcgctggctctccatggagctggcgggaaggatcggcgtctgg
gccaacggcgagttcctgttccccaacaggttcgtggaagaggtcttcgcccgggtgttg
cctgactctccggcggaggcccccctgttcgccccggaggtgatgacctggcggatcctt
ggcctgctgcagcaggtgacgagcaagccaggcttcgaggagatcgcgggctacctctcg
gacgacgcggacgggctgaagcggatgcaactcgcccagcgcatcgccgacaccttcgac
aggtacaccatctaccggccggaaaagcttctgcagtgggaggaaggcgcagaagagcac
tggcaggcccagctttggcgggcgctgagcgacggggtcacccaaaagcaccgtgcccgc
ctgctgcacgatttcaggaaggcgctggagagcgggcggctccccgagcagcggcgcatc
tccgtaatcggcatcccgtcgcttccccccttccatctcgaggtcctggcccggatcgcc
cagtatggcgaggtcaacctgttcctcctgaacccctgccgccagtactggggcgagatc
gtctcggagcgcgagttggccaggctggaaaaacgcggggagggggccgagcagtggtac
gagaccggtaacccgcttttggcctcgtggggaaaactgggacgcgacttcttcgaggcg
atcatcgacggctgcggcgagcacgagagacgggacagctttccggaactcccgcagggg
tcgctgctgcacgaggtccaggccgacatcgtggaactgcgcggcgccgaggcggggctg
cgcacggtctcggcgcacgacctctccctcaaggtgcactcctgccactcgcccatgcgc
gaggtggaagtcctctacgacacgctcctctccatattcgatgccgacccgtcgctctcc
ccgcgggacgtgctggtgatgacccccgacatagaagcctacgccccctacatctccgcc
gtgttccagaacccggaagagggtggcgaacgcatcccctattccatcgccgaccgcagc
ctgaagaacgagggggaggcggcgcaggcgctcctcgccatcctcgggctgtgcggcggc
cgctacggcgtggccacggtgctggacatcctggaatccccccccgtggcgcgacgcttc
aacctcagcgaggacgacctggagacggtgcgggattggctcaggggcgccaacatcagg
tggggcatcgatgcggagcagcgcacagagcacggtgttccccccttccgggaaaactcc
tgggccgccggactggaccggctcctcctggggtacgccatgaacggcgacgggcgctcc
ttctataacgggatcctcccctttgacgacatggaggggggcgtggcgctggtcttcggg
cgcttcctcgccttctgcgaaaggctcttcggcgaaacccgggccctcgcccgtcctcgg
gtaccctccgagtgggtgccggcgctgcgccagatcctggacgacttcatcctgccggac
caggagggggagcgcgaactgctctccctgatcgagatcgcgaagaagctcggggagtgc
ggcaatcaggccggtttcgagggacaggtcggcatcgaggtagtgcgctactggctcgag
cagcagttggggagttccgagcgcggcctgggctttctgaccggcggcgtcaccttctgc
gccatgcttcccatgcgcagcatccctttcccggttgtcgccctgatcggcatggacgag
gggcagttcccgcgcaggaaccccgcccaggggttcgacctgatgacggcggagcggcgc
gccggagaccgctccccgcgtgacgaggaccgctacctgttcctggaggcgctgttgtcg
acccggaaaaggctgcacataagctacgtcgggcagagcatcaaggacaacaaggaactc
ccacccagcgtactggtcagcgaacttttggactacctggagaggtgtttcgtcacctcc
aatgggacgcccgccggagcggtgctgcaccacccgctgcagcccttcagccagaagtac
ttcaccggcaaccccgcccttttcagctattcgcggcgaaactgcgcgggtgccgcagcc
aagatgtcgcccccctctaccccgccgccgtttctggaggcgcctctttctccttgggag
gaggaatccaccgtcactctcaaggccctcatcgattttctgtgcaacccggccaaggaa
ctgctgcggcgccggctcggcatcaggatcgagcagggggccgagccgctggaggaggcg
gaaccgttctccctcccgaccctgaccaaataccaattggagcaggagatggtgacggcc
cttttgcgcggcgaggacctggacgtcccctatgccgtggcctgcgcccagggagacctg
cctcccggcgtctgcgggtcggcgctgttccggaagctgggggagccggcaacggagttc
gccgccaaggtcgccgaggttgccagcgcagagccactccctcccctggacatcgacctg
aagctttccggcggccggatcctcgggcgcatagagaacctgcggagcgaccgcatggtg
cgctaccgctacacgaagctgaaggcgaaggaccagctgcggctctgggtcgagcacctg
gcgctcaactgcgcacgggccgtcgggtacccgctgcaaagcacctttgtcgccgccgac
agcaccatacatttcccccccgtcgatgagtgcgcggagcagttggagcggctgctggag
ctgtaccgcaaggggatgacctgcccgttgaagttcttcccggaaacctccctggagtac
gccaggaagtcgcgcgacccgaagaaggcgggcaaggctctgaccgacgccctgggcaag
tggcgcggcagcgagttcttcgaaggcgaggggaaggacgaccactgccgccgctgcttc
ggtgatgaggcaccgctggacgaggagttcacggccgtggcgctccagatctgggggccg
cttctggatcaccagaccaatgccctcaccccgaccctctcccggagggagagggaggat
aaaacatga
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