KEGG   Geobacter sp. M18: GM18_0436
Entry
GM18_0436         CDS       T01421                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
geb  Geobacter sp. M18
Pathway
geb00300  Lysine biosynthesis
geb00470  D-Amino acid metabolism
geb01100  Metabolic pathways
geb01110  Biosynthesis of secondary metabolites
geb01120  Microbial metabolism in diverse environments
geb01230  Biosynthesis of amino acids
Module
geb_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:geb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GM18_0436
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GM18_0436
Enzymes [BR:geb01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     GM18_0436
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF Pro_racemase RGM_C AAA_7
Other DBs
NCBI-ProteinID: ADW11919
LinkDB
Position
complement(545467..546297)
AA seq 276 aa
MKFTKMQGAGNDYVYVNCFEETVQDPAKVAIKVSNRNFGIGSDGLILIMPSEVADVRMRM
FNSDGSESEMCGNGIRCVAKYAYDHGIVAGKEITAETGAGILTLQLFTGQDSKVEKVRVN
MGPPRLTRKEIPMLGNPDEKVINEPLNILHSTFHITCASMGNPHCVIFVDDVDKFPVEKY
GPVIENHEMFPRRTNVEFVQVISRSEVRQRTWERGAGETLACGTGSSAVTAACVLNGLTG
KKILNHLSGGDLEMEWSEDGNIYMTGPAVEVFSGEI
NT seq 831 nt   +upstreamnt  +downstreamnt
atgaaattcacaaagatgcagggcgccggcaacgactacgtatatgtcaactgtttcgag
gaaaccgtgcaggatcccgccaaagtggccatcaaggtatccaaccgcaacttcggcatc
ggctccgacggcctgatcctgatcatgccgagcgaggtggccgacgtcaggatgcgcatg
ttcaactcggacggctccgagagcgagatgtgcggcaacggcatccgctgcgtcgccaaa
tacgcctacgaccacggcatcgtggccgggaaggagatcaccgccgagaccggcgcaggg
attctcaccctgcagcttttcaccggccaagacagcaaggtggagaaggtccgggtcaac
atgggtcccccccgcctgacccggaaggagatccccatgctcgggaatcctgacgagaag
gtgatcaacgagccgctcaacatcctgcactccaccttccacatcacctgcgcctcgatg
gggaacccgcactgcgtcatcttcgttgatgacgtggacaagttcccggtcgagaagtac
ggcccggtgatcgagaaccacgagatgttcccgcgccgcaccaacgtagagttcgtgcag
gtgatctcccggagcgaggtgcgccagcgcacctgggagcgcggcgccggcgagaccctg
gcctgcggcaccggttccagcgcggtaaccgccgcgtgtgtgctaaacggcctgaccggg
aagaagatcctgaaccacctaagcggcggcgacctggagatggagtggagcgaggacggc
aacatctacatgaccggccccgccgtcgaagtcttcagcggcgaaatctaa

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