Geobacter sp. M18: GM18_0436
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Entry
GM18_0436 CDS
T01421
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
geb
Geobacter sp. M18
Pathway
geb00300
Lysine biosynthesis
geb00470
D-Amino acid metabolism
geb01100
Metabolic pathways
geb01110
Biosynthesis of secondary metabolites
geb01120
Microbial metabolism in diverse environments
geb01230
Biosynthesis of amino acids
Module
geb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GM18_0436
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GM18_0436
Enzymes [BR:
geb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GM18_0436
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Gene cluster
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
RGM_C
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ADW11919
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Position
complement(545467..546297)
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AA seq
276 aa
AA seq
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MKFTKMQGAGNDYVYVNCFEETVQDPAKVAIKVSNRNFGIGSDGLILIMPSEVADVRMRM
FNSDGSESEMCGNGIRCVAKYAYDHGIVAGKEITAETGAGILTLQLFTGQDSKVEKVRVN
MGPPRLTRKEIPMLGNPDEKVINEPLNILHSTFHITCASMGNPHCVIFVDDVDKFPVEKY
GPVIENHEMFPRRTNVEFVQVISRSEVRQRTWERGAGETLACGTGSSAVTAACVLNGLTG
KKILNHLSGGDLEMEWSEDGNIYMTGPAVEVFSGEI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacaaagatgcagggcgccggcaacgactacgtatatgtcaactgtttcgag
gaaaccgtgcaggatcccgccaaagtggccatcaaggtatccaaccgcaacttcggcatc
ggctccgacggcctgatcctgatcatgccgagcgaggtggccgacgtcaggatgcgcatg
ttcaactcggacggctccgagagcgagatgtgcggcaacggcatccgctgcgtcgccaaa
tacgcctacgaccacggcatcgtggccgggaaggagatcaccgccgagaccggcgcaggg
attctcaccctgcagcttttcaccggccaagacagcaaggtggagaaggtccgggtcaac
atgggtcccccccgcctgacccggaaggagatccccatgctcgggaatcctgacgagaag
gtgatcaacgagccgctcaacatcctgcactccaccttccacatcacctgcgcctcgatg
gggaacccgcactgcgtcatcttcgttgatgacgtggacaagttcccggtcgagaagtac
ggcccggtgatcgagaaccacgagatgttcccgcgccgcaccaacgtagagttcgtgcag
gtgatctcccggagcgaggtgcgccagcgcacctgggagcgcggcgccggcgagaccctg
gcctgcggcaccggttccagcgcggtaaccgccgcgtgtgtgctaaacggcctgaccggg
aagaagatcctgaaccacctaagcggcggcgacctggagatggagtggagcgaggacggc
aacatctacatgaccggccccgccgtcgaagtcttcagcggcgaaatctaa
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