Geobacter sp. M18: GM18_0703
Help
Entry
GM18_0703 CDS
T01421
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
geb
Geobacter sp. M18
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
geb03009
]
GM18_0703
Enzymes [BR:
geb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
GM18_0703
Ribosome biogenesis [BR:
geb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GM18_0703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ADW12184
UniProt:
E8WS13
LinkDB
All DBs
Position
complement(855095..856054)
Genome browser
AA seq
319 aa
AA seq
DB search
MEPIELTFPCDADPERLDSFISRSVPELTRSAALRLIETGFATVNGQKQKPALRLKGGEV
VTVIVPPPTPAEPQPEEIPLEILYEDADVVVVNKGAGMVVHPGAGNAEGTLVNALLAHCK
DLSGIGGELRPGIVHRIDKDTSGTLVIAKSDRAHNGLAEQFKVHSIKRIYLALVYGSPKE
ERGHIESVIGRHPVERKKMSGKARHGKNAITHWRVEARYPGITLVRLKLETGRTHQIRVH
LSEAGHPLLADEVYGGGSRLAQLKDPVLKQMIKAMGRQALHAKTLGFLHPVTGEYLEFDA
ELPPDMAGIIAYLEEKNRD
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaacctattgaactcaccttcccctgcgacgcagatcccgaacggctcgacagcttc
atatcccgcagcgtccccgaactcacccgctcagcggcgctcaggctgatcgagaccggc
tttgcgacggtgaacggacagaagcaaaagcccgcccttagactgaaggggggcgaggta
gtgacggtgatcgttccgccgccgacacccgcagaaccgcagcccgaggagatcccgctc
gaaatcctctacgaggatgccgatgtcgtggtggtgaacaagggcgcggggatggtggtg
cacccgggggccggcaatgccgaggggacgctggtgaatgcgctgcttgcccactgcaag
gacctctccgggatcggcggcgagttgcgcccgggtatcgtgcaccgcatcgacaaggac
acctccggcaccctggtgatcgccaagagcgaccgggcccacaacgggctggcggaacag
ttcaaggtgcacagcataaagcggatctacctcgcgctggtgtacggcagccccaaggag
gagagggggcacatcgagtccgtcatcggccgccatccggtggagaggaagaagatgtcg
ggcaaggcccggcacggcaagaacgccatcacccactggcgcgtcgaggcgcgctacccg
ggcatcaccctggtgcgcctgaagctggagacggggcgcacgcaccagatcagggtgcac
ctctccgaggcggggcatccgcttttggcggacgaggtctacggcggcggcagccggctg
gcacagctgaaggacccggtcctcaagcagatgatcaaggcgatgggacgccaggcgctg
cacgcgaagaccctcggcttcctgcacccggtgaccggagagtatctggagttcgatgcg
gagctgccgccggacatggccgggatcatcgcctatctggaagagaaaaaccgggactag
DBGET
integrated database retrieval system
