Geobacter sp. M18: GM18_0708
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Entry
GM18_0708 CDS
T01421
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
geb
Geobacter sp. M18
Pathway
geb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GM18_0708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geb03400
]
GM18_0708
Enzymes [BR:
geb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GM18_0708
DNA repair and recombination proteins [BR:
geb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GM18_0708
Prokaryotic type
GM18_0708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADW12189
UniProt:
E8WSN1
LinkDB
All DBs
Position
866834..867526
Genome browser
AA seq
230 aa
AA seq
DB search
MSTESQIRLEPSWKSHLLGEFDKPYMQDLREFLRQEISRRKVIYPKGSEYFNAFNSTSFE
KVRVVILGQDPYHGPDQAHGLCFSVQHGVETPPSLVNIFKEIQSDLGLSPADFRHGHLKA
WADQGVLLLNSVLTVEAGRAASHQGRGWETFTDRAISLLNEEKDRLVFMLWGAYAQKKGA
VIDQTRHLVLCAPHPSPLSAHRGFLGCRHFSKANAYLVQHGLEPIDWRLQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgagtcacagatacggctggagccgagttggaagtcacatctcctgggtgag
tttgacaagccctacatgcaggatctcagggagttcctgcgccaggagatatccaggcgg
aaggtcatttatccgaaggggagcgagtacttcaacgccttcaactccacctcctttgag
aaggtgagggtggtcatcctcggacaggacccgtatcacgggccggaccaggctcacggg
ctctgcttttccgtgcagcacggggttgagactcccccctcgctggtgaacatcttcaag
gaaatacaaagtgatctggggctgtcaccggccgatttcaggcacgggcacctgaaggcg
tgggccgatcagggcgtcctgcttctaaacagcgtactgacggttgaggcaggcagggct
gcttcacaccagggaagagggtgggagaccttcactgaccgggcgatctcgctgttgaac
gaggagaaggaccgcctcgtcttcatgctgtggggcgcctacgcgcagaagaaaggtgcc
gtgatcgaccagacgcgccatctcgtgctatgcgcaccgcacccttcacctctgtcggcg
caccggggattcctgggatgtcgccacttctccaaagccaacgcctacctggtgcagcac
ggcctggaaccgatcgactggcggctgcagtga
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