KEGG   Geobacter sp. M18: GM18_1405
Entry
GM18_1405         CDS       T01421                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
geb  Geobacter sp. M18
Brite
KEGG Orthology (KO) [BR:geb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:geb03400]
    GM18_1405
Enzymes [BR:geb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GM18_1405
    5.6.2.6  RNA 3'-5' helicase
     GM18_1405
DNA repair and recombination proteins [BR:geb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GM18_1405
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD WHD_4th_Lhr Helicase_C WHD_3rd_Lhr ResIII Cas3-like_C_2 DUF6406 PhoH AAA_25 TetR_C_11
Other DBs
NCBI-ProteinID: ADW12873
LinkDB
Position
complement(1706468..1710946)
AA seq 1492 aa
MPPSILKHFHPLIQKWFTEKVGEPTDVQFRAWTEISRERHVLVTAPTGSGKTLAAFLWAI
NQLVTGAWPCGETRVVYVSPLKALNNDVRRNLLTPLSQLRELFAAQGVDFPAIAVQTRSG
DTPGDERRRMLRHPPEILITTPESLNILVTSKGSRATLAGVATVILDEIHAVAGDKRGTH
LITAVERLTLLSGEFQRIALSATVRPLETVAEFVAGLRQVGHRYQPRPVALVRGEQEKRF
SLEISAPEMAAPGAAEELWPALVVKFTDIITRHHSTLFFANSRRTTEKVTRLINEHSGEE
LAYSHHGSLSREIRLAVEERLKRGELKAIVATNSLELGIDIGKLDSVVLIQTPRSISSAI
QRIGRSGHGVGEVSSGILFPTYGMDFVCAAVIARAMAEGEIEELHPVEAPLDLLVQIILS
MALAEQWHLDELYDFLRSCYPYRNLTRQQFDLVIGMLEGKYADSHVPELRPRVTVDRLEE
TIVTHPALSMLIYLEGGTIPERGYFELRLKETGAKIGELDEEFVWERRIGDTFALGAQVW
QITEIGHSTVLVVPAGKPQQIIPFWRAEELDRDFFYSEKISSFLEQCDERLGQKGLVEDL
IQRHFMDSGAAQALEGYLKLQKEATRASLPHRRHLLVEQFRDPAAGAETQQIILHTLWGN
AVNRPFTFALTAAWESRYGYPLQAFYNNDGIALLLPHEIDRLDEILELVTPENIESLLRG
ALEGTGYFGARFRENAGRALLLSRSNFKRRMPLWLNRLRSKKLLASVLRYRDFPVLLETW
RSALQDDFDLVHLKRLLEEIQDGGIAVTRVRTTKASPFAQGLIWLQTNKYVYEDDTLGGG
RRSALGSDFLKEMALSPHLRPRLPADLVRIFEQKKQRLAAGYAPDSARELIDWVKERLLI
PLMEWPELLAATERESGLSREELLSQVADRLIVLELPQAEFPLVAALEMIPEVARGLALT
REELSLAPLVEKERLPELLQESLTRLMERDRRGAGEGTEEEEPAGVAIVGRWLSCYGPVE
LTRLQRTLGLSDALFRDTVQSLEETGTMLIDQFTEQGTQPQICDAVNLEALLRMLRRSRK
PVFEALDLSRLPLFLATVQGLAASGSSAEDLRERLERLLGAPLPASLWEEEVLPARLHPY
FGAWLDSLMQTSDLLWFGCGTKRLSFAFPEDLDLFLDTENAGPDHGPEQPSPLIPDPRGH
YNLTSICSISGLPAATVTAELWQGAWRGELSNDSFVAVRKGILNRFELPQPDPSHSRHPR
RLPGSRWSRVQEGPGNWYLLPGPEGATDVLEKEERNKDRVRVLLERYGILFKELLARELP
PLQWGRLFRTLRIMELSGEVLSGNFFSGIPGLQFISPEAYRLLERGMQADAVFWLNAADP
ASLCGSGLEGLRDRLPPRLPSTHLVYRGSDLVLVSRRYGKEVEIKVEPEDQRLADYLAFF
NILLSRDFNPMKRIQVELINGRPAASSPYTGALLDFGFQEAYSGLELWRRYS
NT seq 4479 nt   +upstreamnt  +downstreamnt
atgcctccatcgatcctgaaacatttccacccgctgatccagaagtggttcaccgagaaa
gtgggagagccgaccgatgtacagttccgcgcctggaccgagatcagccgggagcgccac
gttctggtcacggcgccgaccggcagcggcaagacgctggcggcgtttttgtgggcgata
aaccagctggtcaccggagcctggccctgcggtgaaaccagggtggtctacgtctcgccg
ctcaaagccctcaacaacgacgtgcggcgcaacctgctgacaccgcttagccagctgcgc
gaactcttcgccgcgcagggggtcgatttccccgccatagccgtccagaccagaagcggc
gacacccccggcgacgagcgccgcaggatgctgcgccacccccccgagatactcatcacc
accccggagagcctcaacatcctggtcacctccaaggggagcagggccacccttgccggt
gtcgccaccgttatcctggacgagatccacgccgtagccggagacaagcgcggcacgcac
ctgatcaccgcggtggaaaggctgacccttttaagcggcgagttccagcgcatcgccctt
tcggcgacagtgcgccccctggagaccgtagccgagttcgtcgcggggctgcggcaggtc
gggcaccgctaccagccgcgcccggtggcgctggtccgcggggagcaggagaagcggttc
agcctcgagatcagtgcgcccgaaatggcggcgccgggagcggccgaggaactctggccc
gccctggtggtaaagttcaccgacatcatcaccaggcaccactccaccctgttcttcgcc
aacagcagaaggaccacggaaaaggtgacccggctgatcaacgagcactcaggcgaggag
ctcgcctactcgcaccacggctcgctgtcgcgggagatacggctggccgtggaggagcgc
ctgaagcgcggcgagctgaaggcgatcgtcgccaccaattcgctggagctcggcatcgac
atcggaaagctggatagcgtggtcctgatccagaccccccgctccatatcctccgccata
cagcgcatagggcgctccggacacggcgtgggcgaggtcagcagcggcatcctcttcccc
acctacggcatggacttcgtctgcgccgcggtgatcgcgcgtgccatggccgagggggag
atagaggaactgcacccggtggaggcgccgctggatctcctggtccagatcatcctgtcg
atggccctggccgagcagtggcatctggacgagctctacgacttcctgagaagctgctac
ccctaccggaacctgacccgccagcagttcgacctcgtgatcggcatgctggaggggaag
tatgccgactcacatgtgccggagctgcgcccccgggtgacggtggaccggctagaagaa
accatcgtgacacaccccgcgctctcgatgctcatctacctggagggagggacgatcccg
gagcggggttacttcgagctccgcctgaaggagacgggcgcgaagataggcgaactggac
gaggaattcgtgtgggagagaaggatcggcgacaccttcgccctgggggcgcaggtatgg
cagatcaccgagatcggccacagcacggtgctggtggtgccggccggaaagccccagcag
atcatcccgttctggcgggccgaggagctggaccgcgatttcttctactcggagaagatc
tcctccttcctggagcagtgcgacgagcggctcgggcaaaagggtctggtcgaagatctc
atccagcggcatttcatggattccggcgcggcacaggccctggagggctatctcaagctg
caaaaggaggcgacccgcgcctccctgccccaccgccgccacctgctggttgagcagttc
cgcgatcccgccgcaggagcggagacgcagcagatcatcctgcacaccctctggggcaac
gccgtcaaccgtccgttcaccttcgccctcaccgccgcctgggaaagtcgctacggctat
ccgctgcaggccttctacaacaacgacggcatagcgctgctgctcccccacgagatcgac
aggctcgacgagatcctggagctggtcaccccggagaatatcgagtccctgctcaggggt
gcgctggaggggaccggctacttcggcgcgcgtttcagggagaacgcggggcgggcgctt
ttgctctcacggagcaatttcaagaggagaatgccgctctggctgaaccgcctgcgctca
aagaagctcctcgcctcggtgctcaggtaccgtgacttccccgtcctcctggagacctgg
cgctcagcgctgcaggacgacttcgatctggtgcatctgaagcgccttttggaggagatc
caggacggcggcatcgcggtcacccgggttcgcaccaccaaggcctcgccgttcgcgcag
gggctgatctggctgcagaccaacaagtacgtctacgaggacgacaccctgggcggcggc
cggagatcggccctggggagcgacttcctgaaggagatggcgctctccccgcacctgcgg
ccacgcctgccggccgacctggtacggatcttcgagcagaaaaagcagcggctcgcggcg
ggctacgctccggattcggcgcgggagctgatcgactgggtcaaggaaaggctgctcatc
ccgcttatggagtggccggagctccttgcggcgacggagcgcgagagcggcttgtccagg
gaggagttgctgtcgcaggtggccgatcggctgatagtgctggaactgccgcaggccgag
ttcccgttggtcgcggccttggagatgatccccgaggtcgcccgcgggttggcactgacc
agggaggaactctcgctggcgcctttggttgaaaaggaacgtctgccggagttgctgcag
gaatcgctcacccggcttatggagcgggacaggcgtggcgccggggaggggacggaggaa
gaggaacctgccggcgtcgctattgtgggaagatggcttagctgttacggccccgtggag
ctaaccaggctgcagcgaacgctggggctttccgacgccctttttcgcgatacggtgcag
agcctggaagagaccggcaccatgctgatcgaccagttcaccgagcaggggacgcagccg
cagatctgcgatgcggtgaacctggaggcgttgctgcgcatgttgcgcaggtccagaaag
ccggtcttcgaggcgctggatctctcccggctccccctgttcctggccacggtacagggg
ctcgccgcttcggggagttccgcggaagatctcagggagaggctggagcgactgctgggg
gctccccttcctgcgagcctctgggaggaagaggtcctgcccgcgcgccttcatccctac
ttcggagcctggctggacagcttgatgcagaccagcgacctgctctggttcggttgcggt
acgaagaggctttccttcgccttcccggaggatctggacctgttcctggatacggagaac
gcgggtccggatcatgggcctgaacagccctctcctctcatcccggatccaagggggcac
tacaacctcacctcgatctgctccatctcaggcctccccgcggcgacggtcaccgcagaa
ctctggcagggcgcctggaggggggaattgagcaacgactccttcgtggcggtgcgcaag
gggatcctgaaccggttcgagcttccgcaacccgacccgagccacagccggcacccaagg
cgcctgcccggaagccgctggagccgcgtacaggaaggcccgggcaactggtacctcctc
cccgggccggaaggggcgacggacgtgctggaaaaggaggagaggaacaaggaccgggtg
cgcgtgctcctggagcgctacgggatcctgttcaaggagcttctggcgcgggagctccct
cccctgcaatggggccggctgttcaggaccctgcgcatcatggagctgtcaggggaggtg
ctgtccggaaatttcttctccggcatacccggcctgcagttcatctctcccgaagcatac
cgcctcctggagcgcgggatgcaggcggacgcggtcttttggctcaacgccgccgaccct
gcctccctgtgcggcagcgggctggagggtctgcgggaccggctccccccccggctccct
tcgacccacctggtgtaccggggctccgatctggtgctggtatcgaggcgctacggcaag
gaggtcgagatcaaggtggagccggaagaccagaggcttgcggactaccttgcttttttc
aacatcctcctctcccgcgatttcaatccgatgaaaaggatccaggtcgaactgatcaac
ggacgacccgccgcctcctcgccgtacaccggcgcgctgcttgatttcggcttccaggaa
gcctacagcgggctggagctctggagaagatacagctga

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