Geobacter sp. M18: GM18_1497
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Entry
GM18_1497 CDS
T01421
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
geb
Geobacter sp. M18
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
geb03019
]
GM18_1497
Messenger RNA biogenesis [BR:
geb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GM18_1497
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
ADW12964
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Position
1813355..1814512
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AA seq
385 aa
AA seq
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MKKTCVAEIKDRDLVEAVFLVKEKIVAMAKNGKPYLTLKLMDKTGEVDAKVWDNADQVGS
LFDRNDFLAVKGKASVYLGKMQLIVSELKRVPEESVELADFLPETDSDIKAMVAELHALI
ASLKDPDLARLLRSFFEDPELLAQYRTAPAAKGMHHVYLGGLLEHSLAVARLVDAMVPLY
HGLNRDLLVAGALLHDIGKVREMTYLRCFDYSDEGKLIGHITIGVEMLQERIVKLPDFPA
ELAMLLKHMILSHHGQYEYGSPKRPKTLEATILNYLDDLDSKINGIRTHIRKEPDNPSRW
TAYHRLYDRYFFKEKPLAEEGGGERPEECLEPSELMPETVAAPAPAVGAAPQQPAMEKPA
PRQDQRNSDQGRKSFSNNPFAILKK
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaaacatgcgttgccgaaataaaggaccgtgacctggtggaagcggtcttcctg
gtcaaggagaagatcgtcgccatggccaagaacggcaagccgtacctcaccctgaagctg
atggacaagaccggtgaggtggatgcgaaggtctgggacaacgcggaccaggtgggctcc
ctcttcgaccgcaacgactttctggcggtcaaggggaaggcgagcgtctacttggggaag
atgcagctgatcgtctccgaactgaagcgggttcccgaggagtcggtggagcttgccgac
ttccttcccgagaccgacagcgacatcaaggccatggtggcagagctgcacgccctgatc
gcctcccttaaggatcccgacctggcgcggctgctgcgctccttcttcgaggacccggag
ctcctggcgcaatacaggacggcccccgccgccaaggggatgcaccacgtctacctcggc
gggcttttggaacactcgctggccgtcgccaggctggtcgacgccatggtgccgctctac
catgggctgaaccgcgacctcctcgtcgccggcgcgctcttgcacgacatcgggaaggtg
cgcgagatgacctacctgcgctgtttcgactattccgacgaggggaagctcatcggccac
atcaccatcggcgtcgagatgctgcaggagcggatagtcaagctcccggacttcccggcc
gagctcgccatgctcttgaagcacatgatcctctcgcaccatggccagtacgagtacggc
tccccgaagcgtccgaaaacccttgaggcgaccatcctgaactacctggacgacctcgac
tcgaagatcaacgggatcaggacccacatccgcaaggagccggacaacccgtcgcgctgg
accgcgtaccaccgactctacgaccgctacttcttcaaggagaagcctcttgcggaagag
gggggaggggagcgccccgaggaatgcctggagccttccgagctgatgccggaaacggtg
gccgctcccgcaccggcggtgggcgcggcgccgcagcaaccggcgatggagaagcccgcg
ccgcgccaggaccagcgcaacagcgatcagggtcgcaagagcttcagcaacaaccccttc
gccatcctgaagaagtga
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