Geobacter sp. M18: GM18_1602
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Entry
GM18_1602 CDS
T01421
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
geb
Geobacter sp. M18
Pathway
geb00061
Fatty acid biosynthesis
geb00071
Fatty acid degradation
geb01100
Metabolic pathways
geb01212
Fatty acid metabolism
geb02024
Quorum sensing
geb04146
Peroxisome
Module
geb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GM18_1602
00071 Fatty acid degradation
GM18_1602
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GM18_1602
09145 Cellular community - prokaryotes
02024 Quorum sensing
GM18_1602
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
geb01004
]
GM18_1602
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
geb04147
]
GM18_1602
Enzymes [BR:
geb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GM18_1602
Lipid biosynthesis proteins [BR:
geb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GM18_1602
Exosome [BR:
geb04147
]
Exosomal proteins
Exosomal proteins of breast milk
GM18_1602
Exosomal proteins of breast cancer cells
GM18_1602
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADW13068
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All DBs
Position
1942658..1944346
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AA seq
562 aa
AA seq
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MYNPQTMDTITALIDESCLRNPDRTAFRHKVRGVWQETSYRALRETSDGIAAGLLRSGFR
PGDHAAILAASSPRWVTVYLGILKAGGVVVPIDVELKEIEVSHILSHSEARAVFVDEEGI
ELVAGLWEHLPELRLVVRVPGPGTPSRPVPVPAFRPELIPLHVLTDATGAFKAPPPIGIA
LILYTSGTTGRSKGAILTHANIVSNIRSTALHLGVDDSVHTLSFLPINHVFEQVCGILIP
LSLGGKVSFCESLKKLGENLAEVRPTFFVGVPAVYRMILDRIMKRIEGDQVSRLLYSFPL
SRPLVVWGVRRKLGRGTIFVSGGAALDPAITAGYRNLGVTVLQGYGITETSPVIAAESRG
ETRPGSVGRVLVGLEVRIDDPDGEGVGEILVKGPNVMQGYFKDPDATADVLADGWYRTGD
LGRLDRDGFLYICGRAKSLIVTPNGKNIYPEEVEGEILKSSLVAEVVVYAHRSGQVTEEI
RAVIRPDPEALEEYAARQGKTLSAGEVEALVRSEVGRACDRLAPYKRVRKIMIREEDFPK
TTTRKIKRFEVQALVAREHGAG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgtataatccgcaaactatggataccatcaccgccttaatcgacgagagctgtctccgc
aacccggaccgtaccgccttccgtcacaaggtgcgcggcgtgtggcaggagaccagctac
cgtgccctgcgggagacctccgacggcatcgccgccggcctgctgcgcagcgggttccgt
cccggggatcatgccgccatactcgcagcctcctccccgcgctgggtcaccgtttacctg
gggatcctgaaggcgggcggtgtcgtggttcccatcgacgtggagctgaaagagatcgag
gtcagccatatcctttcccacagcgaggcccgcgcagttttcgtggatgaagaaggcatc
gagctggtcgcagggctctgggagcatttgcccgagcttcgactggtggtgcgggtgccc
gggccggggacaccatcgcggccggtacccgtccctgcctttcgtccggagctgattccc
cttcatgtccttacagacgcgaccggagccttcaaggcgcctccgcccatcgggatagcg
cttatcctctatacctcaggaaccacggggcgctccaagggggcgatacttacccacgcc
aatatcgtttccaacatccgcagtaccgccctccacctgggcgtggacgactccgttcat
accctgtcctttcttcccatcaaccacgtgttcgagcaggtctgcggcatcctgatcccg
ctctctctggggggtaaggtctccttctgcgagtccctgaaaaagctgggggaaaacctg
gcggaggtgagacccaccttcttcgttggggtccccgccgtgtaccgcatgatcctggac
cgcatcatgaagaggatcgagggcgaccaggtgtcccgcctcctttactctttcccgctg
tcacgaccgctcgtcgtgtggggggtcaggaggaagctggggcgggggaccatcttcgtc
agcggtggagcggcccttgaccccgccattaccgcgggctaccggaatctgggggtgacc
gtcctccagggctacggcatcaccgagacctcgccggtcatcgccgcggagtcccgcggc
gaaacccggccgggaagcgtcgggcgggtcctggtcggcctggaggtccgcatcgacgac
cccgacggggaaggcgtgggggagatcctggtcaaggggccgaacgtgatgcaggggtac
ttcaaggaccccgatgccactgccgacgtcctggccgacggctggtaccgcaccggcgac
ttggggcgcctggaccgggacggctttctctacatctgcgggcgggccaaaagccttatc
gtcacgcccaacggcaagaacatctaccccgaggaggtggagggggagatcctgaaaagt
tcgctggtggccgaagtggtggtctatgcccacaggagcgggcaggtcaccgaggagatc
agggccgtgatccgacccgatcccgaggcgctggaggaatacgcggcgcgccagggaaag
accctgtcagcgggcgaggtggaggcgctcgtcaggagcgaggtgggccgcgcctgtgac
cggctggcgccctacaagcgggtgaggaagatcatgatccgggaggaggactttcccaag
accacgacccgcaagataaagaggttcgaggtgcaggcgctggttgcccgggaacatggc
gccgggtga
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