Geobacter sp. M18: GM18_2405
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Entry
GM18_2405 CDS
T01421
Name
(GenBank) alpha amylase catalytic region
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
geb
Geobacter sp. M18
Pathway
geb00500
Starch and sucrose metabolism
geb01100
Metabolic pathways
geb01110
Biosynthesis of secondary metabolites
Module
geb_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
geb_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
geb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
GM18_2405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
geb04147
]
GM18_2405
Enzymes [BR:
geb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
GM18_2405
Exosome [BR:
geb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
GM18_2405
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amylase_C
CBM_48
DUF5696
Malt_amylase_C
Glyco_hydro_77
Motif
Other DBs
NCBI-ProteinID:
ADW13859
UniProt:
E8WNW8
LinkDB
All DBs
Position
complement(2887539..2889920)
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AA seq
793 aa
AA seq
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MQAVVFQYLTGLKRAMFRNARLKGSWDGNGRYSDNWSEVPMVQTTGEDGCPMFTASVSLD
LADQGRTFKWAVTLDGRQGSNVHGIPTELNDVNSSDRYRQFTLNGGGPQTERYYLTYSRR
LGANKHFAAAGAAPGIRFGVWAPNAKKVEVVFGDPAKGYIADDGTGIHPALPVTPLKKGA
DGVWEGGPQGAFDDFKSLPYMYRIVNAQDQTVYRTDIFSRSQIGKGHSNPKTDPNWTGTP
ETLDGTVGCSVVIDPDLVRRAFQSAAPGTPPDLIPAEEFWATEFTAGLPVPTRLEDMIIY
ELHVGSLGYGKPGPGDLGDAMAFLDHLVDLGVNAVELLPLGEFNGTVHWGYGTSHHLCIE
SSAGGRDKYRHFVRECHRRGIAVIQDVVYNHYAQDAERAEWEYDSTSAEQNIYLWYEGTP
PHGGYLGNGSSGSAPRYWEDTVRQQFITSAAFLIEEMHIDGLRVDLTQAIHRDNKLGDLV
ISSANIFGQKMLREWSRTLHMIRPSAMLIAEEHEWEGVIKPPAQGGLGFDARWDVAFYHN
LIGDSDMAGGKARLLKVAGSGGQEALQMDWFSGALYASQYSRIVFDESHDECGNAKGTAR
NMVVAVNYAPIFGATRIAAEARCRLCFGLSVLSAGTPMFFMGAEIGAQKHYTYDNFMNNR
EDILGERAGNGKSLFKFYQDLITLSRRVACIRTRNIDILHQSNSNRVIAFKRWSGDQQVI
IVASFNNAPFANGYVVRKDLVGIPDAGWKEIFNSDAASYGGQNVGNYGAVVFSSQGSINV
VVPASGFVILVKQ
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgtggtgtttcagtacctgaccggcttgaaaagggccatgtttcgcaacgcc
agattgaagggaagttgggacggcaatggccggtattcagataactggagtgaagttccc
atggtgcaaaccaccggtgaggacggatgccccatgttcacggcttcagtctcgcttgat
ctcgccgaccaaggcaggactttcaagtgggccgttacactggacggtcggcaaggtagc
aacgtccacggcatacccacggagcttaacgacgtcaattcttccgaccgctaccgacag
ttcacgttgaacggcggaggaccccagacggagcggtactatttgacttacagccgccgc
ctgggagccaacaagcattttgcagcagcgggtgcggcaccgggaattcgcttcggcgtg
tgggctccaaatgccaaaaaggtggaggtggtcttcggagaccccgctaaaggttacatc
gccgatgacgggaccggaatccatccggcgctcccggtgacgcctctgaaaaaaggggcc
gacggggtgtgggagggaggaccacaaggcgccttcgatgatttcaagagcctcccctac
atgtaccgtatcgtgaacgcccaggatcagacggtttatcgcacggacatcttctccagg
agccagatagggaagggacacagcaatcccaaaaccgacccgaattggacgggcacgccc
gaaacattggatggcactgtcggttgcagtgtggtcatcgacccggacctggtgcggcgc
gccttccaatccgcagctccggggacgccgccggatctcatccccgcggaggagttctgg
gcgactgagttcactgcggggctgccggttcccacccgtctcgaagacatgatcatctac
gaactgcacgtcggctcgctcggctacgggaagccgggccccggcgacttgggtgatgcc
atggcgtttttggatcatctcgtagatctgggtgtgaacgcagtggagctgcttccgctg
ggggagttcaacggaaccgtccactggggatacggcacttcccaccatctctgtatcgaa
tcgagcgcgggggggcgggacaagtaccggcatttcgtgcgggagtgccacaggaggggc
atagcggtcatccaggacgtggtctacaaccactatgcgcaggacgcggagcgggccgag
tgggagtacgactccacctctgccgagcaaaacatctacctctggtatgaagggacgccc
ccgcacggtggctatctgggcaacggttcctccggaagcgcgccccgttactgggaagac
actgtgcgtcagcagttcatcacctcagcggccttcctgatcgaggagatgcacatcgac
gggctgcgggtcgatctgacgcaggcgattcatcgtgacaacaagctgggcgacctggtg
atttccagcgccaacatcttcggccagaagatgctccgcgagtggagccgcaccttgcat
atgatccggcccagcgccatgctgatcgccgaggagcacgaatgggagggggtgattaag
ccgccggcgcagggggggctgggctttgatgcccgctgggacgtggctttctaccacaac
ctgatcggcgactccgacatggcaggtgggaaggcgcgtctgctcaaagtggcagggagc
ggcggccaggaggcgctccaaatggactggttctccggcgcactctacgccagccagtac
agcaggattgtcttcgacgagtcgcacgacgagtgcggcaacgcaaaaggcacggcacgc
aacatggtggtggcggtgaactacgcccccatcttcggcgccacgcgcattgcagcggag
gcgcgttgccggctctgcttcggtctctccgtcctctcggcaggcaccccgatgttcttc
atgggggcggagatcggggcgcagaagcactacacctacgacaatttcatgaacaacagg
gaagacatcctcggtgagcgggcgggaaacggcaagtcgctcttcaagttctaccaggac
ctcatcaccctcagtcgcagggtagcttgcataaggaccaggaacatcgacatcctgcat
cagtccaatagcaatcgcgtgatagccttcaagcgctggagcggcgatcagcaggtcatc
atcgtggcaagcttcaacaacgccccgtttgccaacggctatgtcgtgcgaaaagacctg
gtggggattccagatgccgggtggaaggagatcttcaacagcgatgccgccagctatggc
ggccagaatgtgggtaactacggcgcggtcgttttctccagtcagggatcgatcaacgtg
gtcgttccggccagcggcttcgtcatcctcgtgaagcagtga
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